RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 MKS1Q9NXB0 559 aa14.17□□□□□ -0.14
SRRT-212ENST00000487311 HDGFL3Q9Y3E1 203 aa14.17□□□□□ -0.14
SRRT-212ENST00000487311 ARFGEF3Q5TH69 2177 aa14.17□□□□□ -0.14
SRRT-212ENST00000487311 AP3D1O14617 1153 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 GPR171O14626 319 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 USF1P22415 310 aaPredicted RBP14.16□□□□□ -0.14
SRRT-212ENST00000487311 IGFBP5P24593 272 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 APOBEC3AP31941 199 aaPredicted RBP14.16□□□□□ -0.14
SRRT-212ENST00000487311 IDH2P48735 452 aaKnown RBP14.16□□□□□ -0.14
SRRT-212ENST00000487311 KCNJ10P78508 379 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 EMX2Q04743 252 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 SWI5Q1ZZU3 235 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 GRINAQ7Z429 371 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 ANKRD46Q86W74 232 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 OR4A15Q8NGL6 344 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 PIGXQ8TBF5 258 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 TCP10LQ8TDR4 215 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 CNOT9Q92600 299 aaKnown RBP14.16□□□□□ -0.14
SRRT-212ENST00000487311 SHARPINQ9H0F6 387 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 TMEM181Q9P2C4 612 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 TRAPPC4Q9Y296 219 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 WDR45Q9Y484 360 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 FLVCR1Q9Y5Y0 555 aa14.16□□□□□ -0.14
SRRT-212ENST00000487311 TMEM72A0PK05 275 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 ZC3H12DA2A288 527 aaKnown RBP14.15□□□□□ -0.14
SRRT-212ENST00000487311 VWC2LB2RUY7 222 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 RNASET2O00584 256 aaKnown RBP14.15□□□□□ -0.14
SRRT-212ENST00000487311 ITM2AO43736 263 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 CPSF4O95639 269 aaKnown RBP14.15□□□□□ -0.14
SRRT-212ENST00000487311 MAGEA8P43361 318 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 SLC17A1Q14916 467 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 CASP12Q6UXS9 341 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 HOMEZQ8IX15 550 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 ZIC4Q8N9L1 334 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 KIF18AQ8NI77 898 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 ROPN1LQ96C74 230 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 ZHX1-C8orf76Q96EF9 292 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 PPP1R36Q96LQ0 422 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 C19orf24Q9BVV8 132 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 PRR14Q9BWN1 585 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 EXD2Q9NVH0 621 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 UPB1Q9UBR1 384 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 MOKQ9UQ07 419 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 SLC35A3Q9Y2D2 325 aa14.15□□□□□ -0.14
SRRT-212ENST00000487311 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.14□□□□□ -0.151e-11■■□□□ 13.4
SRRT-212ENST00000487311 TMED7-TICAM2A0A0A6YYA0 188 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 ATP6V1G2-DDX39BF2Z307 99 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 KLF11O14901 512 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 ANKRD28O15084 1053 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 GUSBP08236 651 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 CLK1P49759 484 aaKnown RBP14.14□□□□□ -0.15
SRRT-212ENST00000487311 SAXO2Q658L1 398 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 ARFGAP2Q8N6H7 521 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 EIF1ADQ8N9N8 165 aaKnown RBP14.14□□□□□ -0.15
SRRT-212ENST00000487311 OR8J2Q8NGG1 315 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 MSI2Q96DH6 328 aaKnown RBP14.14□□□□□ -0.15
SRRT-212ENST00000487311 FBXO17Q96EF6 278 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 FOXN4Q96NZ1 517 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 SORCS2Q96PQ0 1159 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 AKTIPQ9H8T0 292 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 NOP53Q9NZM5 478 aaKnown RBP14.14□□□□□ -0.15
SRRT-212ENST00000487311 DCTN4Q9UJW0 460 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 OSGIN1Q9UJX0 560 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 TMED7Q9Y3B3 224 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 SPIN1Q9Y657 262 aaPredicted RBP14.14□□□□□ -0.15
SRRT-212ENST00000487311 PMF1-BGLAPU3KQ54 211 aa14.14□□□□□ -0.15
SRRT-212ENST00000487311 DNPH1O43598 174 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 BPGMP07738 259 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 CDH2P19022 906 aaPredicted RBP14.13□□□□□ -0.15
SRRT-212ENST00000487311 UQCRC2P22695 453 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 NR4A2P43354 598 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 CHRNB3Q05901 458 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 GGTLC2Q14390 218 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 FAM120AOSQ5T036 256 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 ATAD3BQ5T9A4 648 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 ZNF385AQ96PM9 386 aaKnown RBP14.13□□□□□ -0.15
SRRT-212ENST00000487311 SOX7Q9BT81 388 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 C20orf27Q9GZN8 174 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 CHODLQ9H9P2 273 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 FKRPQ9H9S5 495 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 EXOSC3Q9NQT5 275 aaKnown RBP14.13□□□□□ -0.15
SRRT-212ENST00000487311 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.13□□□□□ -0.15
SRRT-212ENST00000487311 ASIC5Q9NY37 505 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 LPAR3Q9UBY5 353 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 AMDHD2Q9Y303 409 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 ANK2Q01484 3957 aa14.13□□□□□ -0.15
SRRT-212ENST00000487311 IGHV4-61A0A0C4DH41 118 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 PRSS51A0A1B0GVH4 220 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 HMGN4O00479 90 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 FKBP2P26885 142 aaKnown RBP14.12□□□□□ -0.15
SRRT-212ENST00000487311 TACR3P29371 465 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 MPGP29372 298 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 THBS2P35442 1172 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 SERPINB5P36952 375 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 PRPS1P60891 318 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 SLC35A1P78382 337 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 LGALS3BPQ08380 585 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 CASP8Q14790 479 aa14.12□□□□□ -0.15
SRRT-212ENST00000487311 PDCD2Q16342 344 aaPredicted RBP14.12□□□□□ -0.15
SRRT-212ENST00000487311 SYPL1Q16563 259 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms