RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CD27P26842 260 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 GPR3P46089 330 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 PITPNBP48739 271 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 HSD17B7P56937 341 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 TNK1Q13470 666 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 EFR3AQ14156 821 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 GPR176Q14439 515 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 TCTE1Q5JU00 501 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 FAAH2Q6GMR7 532 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 PYHIN1Q6K0P9 492 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 PLCZ1Q86YW0 608 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 RCBTB1Q8NDN9 531 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 OR4N2Q8NGD1 307 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 GRPEL2Q8TAA5 225 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 PTCHD1Q96NR3 888 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 TNFRSF13CQ96RJ3 184 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 SLC38A3Q99624 504 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 WACQ9BTA9 647 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 PLSCR3Q9NRY6 295 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 ACOXLQ9NUZ1 547 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 BOLA1Q9Y3E2 137 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 REV3LO60673 3130 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 J3QLW9 94 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 SERPINA3P01011 423 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 MRPL3P09001 348 aaKnown RBP23.98■■□□□ 1.43
HLA-C-208ENST00000487245 ZNF19P17023 458 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 GPR143P51810 404 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 FUT7Q11130 342 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 FAPQ12884 760 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 GGTLC2Q14390 218 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 PLA1AQ53H76 456 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 BICRALQ6AI39 1079 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 SYS1Q8N2H4 156 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 THAP7Q9BT49 309 aaPredicted RBP23.98■■□□□ 1.43
HLA-C-208ENST00000487245 CHRNA10Q9GZZ6 450 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 HDHD2Q9H0R4 259 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 ZCCHC4Q9H5U6 513 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 RPRD1BQ9NQG5 326 aaKnown RBP23.98■■□□□ 1.43
HLA-C-208ENST00000487245 ING3Q9NXR8 418 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 ICAM5Q9UMF0 924 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 MAU2Q9Y6X3 613 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 ANKRD61A6NGH8 418 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 OR6C70A6NIJ9 312 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 OR12D2P58182 307 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 SLC3A1Q07837 685 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 SERTAD2Q14140 314 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 NPSR1Q6W5P4 371 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 ZNF440Q8IYI8 595 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 SAMD12Q8N8I0 201 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 C17orf47Q8NEP4 570 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 BEX2Q9BXY8 128 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 CHRDQ9H2X0 955 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 MKKSQ9NPJ1 570 aaPredicted RBP23.97■■□□□ 1.43
HLA-C-208ENST00000487245 PRODH2Q9UF12 536 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 CHRNA9Q9UGM1 479 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 SLCO1B1Q9Y6L6 691 aa23.97■■□□□ 1.43
HLA-C-208ENST00000487245 AHCYP23526 432 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 CD38P28907 300 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 GABRA4P48169 554 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 AGFG1P52594 562 aaKnown RBP23.96■■□□□ 1.43
HLA-C-208ENST00000487245 SLC16A1P53985 500 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 ACSM3Q53FZ2 586 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 UTS2BQ765I0 119 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 POMGNT2Q8NAT1 580 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 LMX1AQ8TE12 382 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 OIT3Q8WWZ8 545 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 SPACA7Q96KW9 195 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 GTPBP2Q9BX10 602 aaKnown RBP23.96■■□□□ 1.43
HLA-C-208ENST00000487245 OR10A5Q9H207 317 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 EPHA6Q9UF33 1036 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 PPM1BO75688 479 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 CLUP10909 449 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 Q5BKY6 102 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 RLN3Q8WXF3 142 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 LMAN1LQ9HAT1 526 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 OR10H1Q9Y4A9 318 aa23.96■■□□□ 1.43
HLA-C-208ENST00000487245 TDRD6O60522 2096 aaKnown RBP23.95■■□□□ 1.43
HLA-C-208ENST00000487245 A0A1W2PR77 199 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 ANKRD34BA5PLL1 514 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 H0YIG0 161 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 HRKO00198 91 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 NGFRP08138 427 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 OR2T7P0C7T2 308 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 OR10A3P58181 314 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 ACTA2P62736 377 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 ACTG2P63267 376 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 BTG2P78543 158 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 MAT1AQ00266 395 aaKnown RBP23.95■■□□□ 1.42
HLA-C-208ENST00000487245 CRYZQ08257 329 aaKnown RBP23.95■■□□□ 1.42
HLA-C-208ENST00000487245 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.95■■□□□ 1.42
HLA-C-208ENST00000487245 FAM27D1Q5T7N8 215 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 FCRLBQ6BAA4 426 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 TDHQ8IZJ6 230 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 CYB561A3Q8NBI2 242 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 OR2T27Q8NH04 317 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 OR5J2Q8NH18 312 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 TRMT10AQ8TBZ6 339 aaKnown RBP23.95■■□□□ 1.42
HLA-C-208ENST00000487245 AKAP1Q92667 903 aaKnown RBP eCLIP23.95■■□□□ 1.42
HLA-C-208ENST00000487245 SGTBQ96EQ0 304 aa23.95■■□□□ 1.42
HLA-C-208ENST00000487245 MMABQ96EY8 250 aaPredicted RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms