RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 TRIM2Q9C040 744 aa11.76□□□□□ -0.53
SF1-216ENST00000486867 PCDHAC1Q9H158 963 aa11.76□□□□□ -0.53
SF1-216ENST00000486867 BCO1Q9HAY6 547 aa11.76□□□□□ -0.53
SF1-216ENST00000486867 PLSCR4Q9NRQ2 329 aa11.76□□□□□ -0.53
SF1-216ENST00000486867 ING1Q9UK53 422 aaPredicted RBP11.76□□□□□ -0.53
SF1-216ENST00000486867 USP22Q9UPT9 525 aa11.76□□□□□ -0.53
SF1-216ENST00000486867 IGKV3D-15A0A087WSY6 115 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 TMEM72A0PK05 275 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 CCT8L1PA6NM43 557 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 NDUFAB1O14561 156 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 SMAD9O15198 467 aaKnown RBP11.75□□□□□ -0.53
SF1-216ENST00000486867 FRS3O43559 492 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 CYTIPO60759 359 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 PEX19P40855 299 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 NUDT2P50583 147 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 COPZ1P61923 177 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 CSNK2A1P68400 391 aaPredicted RBP11.75□□□□□ -0.53
SF1-216ENST00000486867 SORDQ00796 357 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 PDK3Q15120 406 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 ZNF787Q6DD87 383 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 GTF2IRD2BQ6EKJ0 949 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 ABLIM2Q6H8Q1 611 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 VWA1Q6PCB0 445 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 FCRLAQ7L513 359 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 BTLAQ7Z6A9 289 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 GTF2IRD2Q86UP8 949 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 OR2T12Q8NG77 320 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 OR6K3Q8NGY3 331 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 STK35Q8TDR2 534 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 DNAJA4Q8WW22 397 aaPredicted RBP11.75□□□□□ -0.53
SF1-216ENST00000486867 RASSF5Q8WWW0 418 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 ZNF559Q9BR84 538 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 TACO1Q9BSH4 297 aaKnown RBP11.75□□□□□ -0.53
SF1-216ENST00000486867 OR11A1Q9GZK7 315 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 KLHL28Q9NXS3 571 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 TMEM181Q9P2C4 612 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 LRBAP50851 2863 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 ALPK2Q86TB3 2170 aa11.75□□□□□ -0.53
SF1-216ENST00000486867 NOTCH2Q04721 2471 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 A0A1B0GWA3 101 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 ELOVL7A1L3X0 281 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 ZC3H12DA2A288 527 aaKnown RBP11.74□□□□□ -0.53
SF1-216ENST00000486867 A8MVM7 634 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 SULT2B1O00204 365 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 FESP07332 822 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 IMPDH2P12268 514 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 ENPP1P22413 925 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 AGTR1P30556 359 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 SLC7A2P52569 658 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 SLC16A1P53985 500 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 RGS8P57771 180 aaPredicted RBP11.74□□□□□ -0.53
SF1-216ENST00000486867 HOXC5Q00444 222 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 KRT72Q14CN4 511 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 FXNQ16595 210 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 SWT1Q5T5J6 900 aaKnown RBP11.74□□□□□ -0.53
SF1-216ENST00000486867 GKAP1Q5VSY0 366 aaPredicted RBP11.74□□□□□ -0.53
SF1-216ENST00000486867 ZNF295-AS1Q8N0V1 137 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 SMYD1Q8NB12 490 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 ATP6V1C2Q8NEY4 427 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 ABHD3Q8WU67 409 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 ROBO4Q8WZ75 1007 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 SLC38A4Q969I6 547 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 DDIT4LQ96D03 193 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 PSD2Q9BQI7 771 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 PIF1Q9H611 641 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 SLC24A3Q9HC58 644 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 ARL8BQ9NVJ2 186 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 KLHL13Q9P2N7 655 aa11.74□□□□□ -0.53
SF1-216ENST00000486867 A0A0B4J2E0 115 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 A0A1B0GX12 115 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 LIPT2A6NK58 231 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 ZNF716A6NP11 495 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 ZNF724A8MTY0 619 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 PRKD3O94806 890 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 OPN1SWP03999 348 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 COX6B1P14854 86 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 CXCR1P25024 350 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 KDELR2P33947 212 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 GSK3BP49841 420 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 EGR4Q05215 589 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 LIPEQ05469 1076 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 NPTX1Q15818 432 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 ZNF613Q6PF04 617 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 ULK3Q6PHR2 472 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 ZNF474Q6S9Z5 364 aaPredicted RBP11.73□□□□□ -0.53
SF1-216ENST00000486867 C5orf46Q6UWT4 87 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 LINC00114Q6XXX2 140 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 MEX3BQ6ZN04 569 aaKnown RBP11.73□□□□□ -0.53
SF1-216ENST00000486867 CADM2Q8N3J6 435 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 FITM2Q8N6M3 262 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 OR52E4Q8NGH9 312 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 OR4D11Q8NGI4 311 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 OR6T1Q8NGN1 323 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 C14orf79Q96F83 325 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 LRRC46Q96FV0 321 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 PRRG4Q9BZD6 226 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 KLHL9Q9P2J3 617 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 TAGLN3Q9UI15 199 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 EMC9Q9Y3B6 208 aa11.73□□□□□ -0.53
SF1-216ENST00000486867 PDZD2O15018 2839 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms