RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 PDLIM1O00151 329 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 AGR2O95994 175 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 BPGMP07738 259 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 CREB1P16220 341 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 UQCRC2P22695 453 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 MAGEA8P43361 318 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 PHC1P78364 1004 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 PLAURQ03405 335 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 FUT5Q11128 374 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 CYB5R2Q6BCY4 276 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 FRRS1Q6ZNA5 592 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 ANKRD46Q86W74 232 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 C10orf105Q8TEF2 133 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 OIT3Q8WWZ8 545 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 PPP1R36Q96LQ0 422 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 AKTIPQ9H8T0 292 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 POLE3Q9NRF9 147 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 CR1P17927 2039 aa16.45■□□□□ 0.22
GMDS-205ENST00000486793 PRAMEF27A3QJZ7 478 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 EFNA4P52798 201 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 SMU1Q2TAY7 513 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 CASP12Q6UXS9 341 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 RIBC1Q8N443 379 aaPredicted RBP16.44■□□□□ 0.22
GMDS-205ENST00000486793 ARFGAP2Q8N6H7 521 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 CNOT9Q92600 299 aaKnown RBP16.44■□□□□ 0.22
GMDS-205ENST00000486793 PROX1Q92786 737 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 DPY30Q9C005 99 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 EXOSC3Q9NQT5 275 aaKnown RBP16.44■□□□□ 0.22
GMDS-205ENST00000486793 SLC17A5Q9NRA2 495 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 SLC7A10Q9NS82 523 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.44■□□□□ 0.22
GMDS-205ENST00000486793 PARPBPQ9NWS1 579 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 TMEM160Q9NX00 188 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 UPB1Q9UBR1 384 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 LGALS13Q9UHV8 139 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 PMF1-BGLAPU3KQ54 211 aa16.44■□□□□ 0.22
GMDS-205ENST00000486793 TMED7-TICAM2A0A0A6YYA0 188 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 AP3D1O14617 1153 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 ITM2AO43736 263 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 EIF1BO60739 113 aaKnown RBP16.43■□□□□ 0.22
GMDS-205ENST00000486793 LY6HO94772 140 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 C1QCP02747 245 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 IMPDH2P12268 514 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 BMP4P12644 408 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 APOBEC3AP31941 199 aaPredicted RBP16.43■□□□□ 0.22
GMDS-205ENST00000486793 SLC25A3Q00325 362 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 CHRNB3Q05901 458 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 PDCD2Q16342 344 aaPredicted RBP16.43■□□□□ 0.22
GMDS-205ENST00000486793 GPAT3Q53EU6 434 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 TSPO2Q5TGU0 170 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 ANXA8L1Q5VT79 327 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 SAXO2Q658L1 398 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 AMBRA1Q9C0C7 1298 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 FKRPQ9H9S5 495 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 DCTN4Q9UJW0 460 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 TMED7Q9Y3B3 224 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 FLVCR1Q9Y5Y0 555 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 PLCE1Q9P212 2302 aa16.43■□□□□ 0.22
GMDS-205ENST00000486793 F12P00748 615 aaPredicted RBP16.42■□□□□ 0.22
GMDS-205ENST00000486793 NUDT17P0C025 328 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 IGHV4-31P0DP07 118 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 USF1P22415 310 aaPredicted RBP16.42■□□□□ 0.22
GMDS-205ENST00000486793 HTR3AP46098 478 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 SLC35A1P78382 337 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 SLC17A1Q14916 467 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 NUDCD3Q8IVD9 361 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 ARIH2OSQ8N7S6 290 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 VPS37AQ8NEZ2 397 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.42■□□□□ 0.22
GMDS-205ENST00000486793 NEURL3Q96EH8 262 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 NAA11Q9BSU3 229 aaPredicted RBP16.42■□□□□ 0.22
GMDS-205ENST00000486793 OSGIN1Q9UJX0 560 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 SLC9A8Q9Y2E8 581 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 AMDHD2Q9Y303 409 aa16.42■□□□□ 0.22
GMDS-205ENST00000486793 TMEM72A0PK05 275 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 HMGN4O00479 90 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 ZNF208O43345 1280 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 TACR3P29371 465 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 CHI3L1P36222 383 aaPredicted RBP16.41■□□□□ 0.22
GMDS-205ENST00000486793 ETV4P43268 484 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 KHKP50053 298 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 POLR2HP52434 150 aaKnown RBP16.41■□□□□ 0.22
GMDS-205ENST00000486793 LSM11P83369 360 aaKnown RBP eCLIP16.41■□□□□ 0.22
GMDS-205ENST00000486793 TGFBR3Q03167 851 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 IFFO1Q0D2I5 559 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 CASP8Q14790 479 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 MST1LQ2TV78 715 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 C17orf78Q8N4C9 275 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 ZNF781Q8N8C0 355 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 ANKFN1Q8N957 763 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 ZIC4Q8N9L1 334 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 C1orf162Q8NEQ5 155 aaPredicted RBP16.41■□□□□ 0.22
GMDS-205ENST00000486793 PMM1Q92871 262 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 DDIT4LQ96D03 193 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 FBXO17Q96EF6 278 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 ZIM3Q96PE6 472 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 SHARPINQ9H0F6 387 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 LPAR3Q9UBY5 353 aa16.41■□□□□ 0.22
GMDS-205ENST00000486793 MARCOQ9UEW3 520 aaPredicted RBP16.41■□□□□ 0.22
GMDS-205ENST00000486793 NUP214P35658 2090 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms