RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 NRF1Q16656 503 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 FAM174BQ3ZCQ3 159 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 C9orf135Q5VTT2 229 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 HMBOX1Q6NT76 420 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 RNF130Q86XS8 419 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 HTRA1Q92743 480 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 ADAD1Q96M93 576 aaKnown RBP16.91■□□□□ 0.3
COL27A1-205ENST00000485397 MUS81Q96NY9 551 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 DHRS9Q9BPW9 319 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 RHNO1Q9BSD3 238 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 TMEM109Q9BVC6 243 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 CBLN4Q9NTU7 201 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 TMEM181Q9P2C4 612 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 MALT1Q9UDY8 824 aa16.91■□□□□ 0.3
COL27A1-205ENST00000485397 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.91■□□□□ 0.3
COL27A1-205ENST00000485397 TMED7-TICAM2A0A0A6YYA0 188 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 BIRC5O15392 142 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 DNPH1O43598 174 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 DHRS4L1P0CG22 281 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 IMPDH2P12268 514 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 LBPP18428 481 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 FKBP2P26885 142 aaKnown RBP16.9■□□□□ 0.3
COL27A1-205ENST00000485397 S100A3P33764 101 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 MAGEA8P43361 318 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 SLC1A6P48664 564 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 HPCAP84074 193 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 H3F3AP84243 136 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 KRT71Q3SY84 523 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 KLHL17Q6TDP4 642 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 CASP12Q6UXS9 341 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 HIPK1Q86Z02 1210 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 WDR31Q8NA23 367 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 TEX37Q96LM6 180 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 SLC38A1Q9H2H9 487 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 OSGIN1Q9UJX0 560 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 TRAPPC4Q9Y296 219 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 TMED7Q9Y3B3 224 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 ATRQ13535 2644 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 PLCE1Q9P212 2302 aa16.9■□□□□ 0.3
COL27A1-205ENST00000485397 COL6A5A8TX70 2615 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 A0A096LNT2 108 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 FAM234BA2RU67 622 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 E9PBE3 544 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 PDLIM1O00151 329 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 CHRM4P08173 479 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 BGNP21810 368 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 TACR3P29371 465 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 FABP6P51161 128 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 CLNS1AP54105 237 aaKnown RBP16.89■□□□□ 0.29
COL27A1-205ENST00000485397 UFM1P61960 85 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 FBXL14Q8N1E6 418 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 MUC15Q8N387 334 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 OR10H5Q8NGA6 315 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 CCDC115Q96NT0 180 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 INPP5KQ9BT40 448 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 PNPOQ9NVS9 261 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 BTNL2Q9UIR0 455 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 FLVCR1Q9Y5Y0 555 aa16.89■□□□□ 0.29
COL27A1-205ENST00000485397 ZC3H12DA2A288 527 aaKnown RBP16.88■□□□□ 0.29
COL27A1-205ENST00000485397 CCDC154A6NI56 674 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 AGAP5A6NIR3 686 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 ALDOCP09972 364 aaKnown RBP16.88■□□□□ 0.29
COL27A1-205ENST00000485397 IL12AP29459 219 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 CDKN2CP42773 168 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 HTR3AP46098 478 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 POLR2HP52434 150 aaKnown RBP16.88■□□□□ 0.29
COL27A1-205ENST00000485397 SLC35A1P78382 337 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 DPY19L1Q2PZI1 675 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 TSPO2Q5TGU0 170 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 OR7E24Q6IFN5 339 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 ZBTB9Q96C00 473 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 DDIT4LQ96D03 193 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 TRNT1Q96Q11 434 aaKnown RBP16.88■□□□□ 0.29
COL27A1-205ENST00000485397 REPIN1Q9BWE0 567 aaKnown RBP16.88■□□□□ 0.29
COL27A1-205ENST00000485397 SLC7A10Q9NS82 523 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 UPB1Q9UBR1 384 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 HAO1Q9UJM8 370 aa16.88■□□□□ 0.29
COL27A1-205ENST00000485397 FBN1P35555 2871 aaKnown RBP16.88■□□□□ 0.29
COL27A1-205ENST00000485397 A8MV72 311 aaPredicted RBP16.87■□□□□ 0.29
COL27A1-205ENST00000485397 RGS16O15492 202 aaPredicted RBP16.87■□□□□ 0.29
COL27A1-205ENST00000485397 ZNF208O43345 1280 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 EIF1BO60739 113 aaKnown RBP16.87■□□□□ 0.29
COL27A1-205ENST00000485397 GSNP06396 782 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 SLC25A3Q00325 362 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 MPP2Q14168 576 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 RAB35Q15286 201 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 COX20Q5RI15 118 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 CLEC2AQ6UVW9 174 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 LRRC74BQ6ZQY2 392 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 CMIPQ8IY22 773 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 DEPDC4Q8N2C3 294 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 WDR60Q8WVS4 1066 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 PANX1Q96RD7 426 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 NAA11Q9BSU3 229 aaPredicted RBP16.87■□□□□ 0.29
COL27A1-205ENST00000485397 AMBRA1Q9C0C7 1298 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 MEAF6Q9HAF1 191 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 SLC17A5Q9NRA2 495 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 SLC9A8Q9Y2E8 581 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 ATP23Q9Y6H3 246 aa16.87■□□□□ 0.29
COL27A1-205ENST00000485397 SLC1A3P43003 542 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms