RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ZFP64Q9NPA5 681 aa13.15□□□□□ -0.31
LRIF1-202ENST00000485275 RAB26Q9ULW5 256 aa13.15□□□□□ -0.31
LRIF1-202ENST00000485275 CBR3O75828 277 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 CELA3AP09093 270 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 OSMP13725 252 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 CXCR1P25024 350 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 CAPGP40121 348 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 HSPA13P48723 471 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 DSCR4P56555 118 aaPredicted RBP13.14□□□□□ -0.31
LRIF1-202ENST00000485275 B3GALT5-AS1P59052 145 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 TAF11Q15544 211 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 GXYLT1Q4G148 440 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 ZNF766Q5HY98 468 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 TMEM236Q5W0B7 351 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 RRM2BQ7LG56 351 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 DHRSXQ8N5I4 330 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 GNPDA2Q8TDQ7 276 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 TAAR8Q969N4 342 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 CRELD1Q96HD1 420 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 ARL5BQ96KC2 179 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 ANKRD60Q9BZ19 345 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 TTTY12Q9BZ98 90 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 SLC19A3Q9BZV2 496 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 ENKD1Q9H0I2 346 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.14□□□□□ -0.31
LRIF1-202ENST00000485275 TMEM185BQ9H7F4 350 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 ZNF556Q9HAH1 456 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 UBAP1Q9NZ09 502 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 SEC14L4Q9UDX3 406 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 CHRNA9Q9UGM1 479 aa13.14□□□□□ -0.31
LRIF1-202ENST00000485275 TRAV27A0A087WT01 109 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 A0A087WV48 116 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 CDK2AP1O14519 115 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 GLSO94925 669 aaPredicted RBP13.13□□□□□ -0.31
LRIF1-202ENST00000485275 ACADSP16219 412 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 HK1P19367 917 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 RPS5P46782 204 aaKnown RBP13.13□□□□□ -0.31
LRIF1-202ENST00000485275 MEOX1P50221 254 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 PMP22Q01453 160 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 ZNF74Q16587 644 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 RFX4Q33E94 735 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 ZNF620Q6ZNG0 422 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 YRDCQ86U90 279 aaKnown RBP13.13□□□□□ -0.31
LRIF1-202ENST00000485275 GTPBP8Q8N3Z3 284 aaPredicted RBP13.13□□□□□ -0.31
LRIF1-202ENST00000485275 PITX2Q99697 317 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 IL20RAQ9UHF4 553 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 DKKL1Q9UK85 242 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 KLF13Q9Y2Y9 288 aaPredicted RBP13.13□□□□□ -0.31
LRIF1-202ENST00000485275 ORC6Q9Y5N6 252 aa13.13□□□□□ -0.31
LRIF1-202ENST00000485275 LOC100130705A0A1B0GUX0 176 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 OR2M5A3KFT3 312 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 M0R129 80 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 SLC16A6O15403 523 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 DENRO43583 198 aaKnown RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 CH25HO95992 272 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 OPN1LWP04000 364 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 PEPDP12955 493 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 CD46P15529 392 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 SRD5A2P31213 254 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 IFNGR2P38484 337 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 APOBEC1P41238 236 aaKnown RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 HTR3AP46098 478 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 PTGES3Q15185 160 aaKnown RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 TBR1Q16650 682 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 RNFT1Q5M7Z0 435 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 BORAQ6PGQ7 559 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 THSD4Q6ZMP0 1018 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 RASSF6Q6ZTQ3 369 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 IQCF1Q8N6M8 205 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 FAM83FQ8NEG4 500 aaPredicted RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 EXTL1Q92935 676 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 ZBTB8AQ96BR9 441 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 CNBD2Q96M20 576 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 C5orf34Q96MH7 638 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 MUS81Q96NY9 551 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 NDRG4Q9ULP0 352 aaKnown RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 BOKQ9UMX3 212 aaPredicted RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 SIGLEC7Q9Y286 467 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 PCDHGA9Q9Y5G4 932 aaKnown RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 DSPP15924 2871 aaKnown RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 A0A087WZY1 265 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 ZAR1LA6NP61 321 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 FAM166BA8MTA8 275 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 EFCAB9A8MZ26 197 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 FTCDNL1E5RQL4 147 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 H0YAE9 185 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 H3BML4 177 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 BGLAPP02818 100 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 SAGP10523 405 aaPredicted RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 GDF1P27539 372 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 MAGEA5P43359 124 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 CRISP1P54107 249 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 TMPRSS3P57727 454 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 COX10Q12887 443 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 WIPI1Q5MNZ9 446 aaPredicted RBP13.12□□□□□ -0.31
LRIF1-202ENST00000485275 BROXQ5VW32 411 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 RAET1LQ5VY80 246 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 TMEM251Q8N6I4 163 aa13.12□□□□□ -0.31
LRIF1-202ENST00000485275 ZFP62Q8NB50 900 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms