RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 NCMAPQ5T1S8 102 aa9.62□□□□□ -0.87
COL12A1-207ENST00000483888 NAGSQ8N159 534 aa9.62□□□□□ -0.87
COL12A1-207ENST00000483888 PCED1BQ96HM7 432 aa9.62□□□□□ -0.87
COL12A1-207ENST00000483888 RBP7Q96R05 134 aa9.62□□□□□ -0.87
COL12A1-207ENST00000483888 NENFQ9UMX5 172 aa9.62□□□□□ -0.87
COL12A1-207ENST00000483888 TMEM88BA6NKF7 163 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 F6UZH7 168 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 CCSO14618 274 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 TTRP02766 147 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 MTHFD2P13995 350 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 KITLGP21583 273 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 MTNR1BP49286 362 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 SLC10A1Q14973 349 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 DECR1Q16698 335 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 PDLIM3Q53GG5 364 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 ZNF620Q6ZNG0 422 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 BTLAQ7Z6A9 289 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 CYB561A3Q8NBI2 242 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 OR1J1Q8NGS3 322 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 ZNF516Q92618 1163 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 DVL3Q92997 716 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 UCN3Q969E3 161 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 Q9N2J8 555 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 MMP26Q9NRE1 261 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 AK3Q9UIJ7 227 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 KCTD3Q9Y597 815 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 SPTBP11277 2137 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 KIAA1324LA8MWY0 1029 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 TMX2-CTNND1H3BSU7 103 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 RPS18P62269 152 aaKnown RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 ZNF91Q05481 1191 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 SOWAHAQ2M3V2 549 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 AMZ2Q86W34 360 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 FAM26EQ8N5C1 309 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 VGLL2Q8N8G2 317 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 RHOFQ9HBH0 211 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 GOLGA2P5Q9HBQ8 144 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 MYO9BQ13459 2157 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 TRAPPC6AO75865 159 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 HOXB9P17482 250 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 CCR9P51686 369 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 F2RL1P55085 397 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 HSD17B7P56937 341 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 TMEM107Q6UX40 140 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 ASAH2Q9NR71 780 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 PHPT1Q9NRX4 125 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 ACOXLQ9NUZ1 547 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 TAC3Q9UHF0 121 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 ASCC3Q8N3C0 2202 aaKnown RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 HIDE1A8MVS5 230 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 FAM227AF5H4B4 570 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 KCNK5O95279 499 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 CSF3P09919 207 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 IVDP26440 423 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 PIN1Q13526 163 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 UBXN2BQ14CS0 331 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 RGNQ15493 299 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 ZNF704Q6ZNC4 412 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 Q6ZPB1 254 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 RNF180Q86T96 592 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 PGAP3Q96FM1 320 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 SPATC1LQ9H0A9 340 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 SDHAF3Q9NRP4 125 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 PEAK1Q9H792 1746 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 YJEFN3A6XGL0 299 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 FAM171A2A8MVW0 826 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 RNASEK-C17orf49H0YIS7 233 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 LGALS2P05162 132 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 PRDX3P30048 256 aaKnown RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 PTPRCAPQ14761 206 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 PQLC3Q8N755 202 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 OR52N2Q8NGI0 321 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 NPAS1Q99742 590 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 NIFKQ9BYG3 293 aaKnown RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 WWTR1Q9GZV5 400 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 KLHL13Q9P2N7 655 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 KCNG2Q9UJ96 466 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 AKT1S1Q96B36 256 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 TMEM19Q96HH6 336 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 DPH1Q9BZG8 443 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 SRMSQ9H3Y6 488 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 ZNF331Q9NQX6 463 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 MYO5AQ9Y4I1 1855 aaKnown RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 IFT172Q9UG01 1749 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 H7BY64 318 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 K7ERU9 68 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 TERTO14746 1132 aaKnown RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 GRIN3BO60391 1043 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 SHC1P29353 583 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 PCBP4P57723 403 aaKnown RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 Q5PR19 223 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 IL34Q6ZMJ4 242 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 OR14L1PQ8NHC6 308 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 B3GAT2Q9NPZ5 323 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 ASB6Q9NWX5 421 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 TRBV23OR9-2A0A075B6M9 112 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-207ENST00000483888 CDK2AP1O14519 115 aa9.61□□□□□ -0.87
COL12A1-207ENST00000483888 MSX1P28360 303 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms