RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SLC35F4A4IF30 521 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 ELOA3DA6NLF2 546 aaPredicted RBP12.18□□□□□ -0.46
VARS-226ENST00000483275 H7C417 338 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 KLF11O14901 512 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 ITM2AO43736 263 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 MRPL33O75394 65 aaKnown RBP12.18□□□□□ -0.46
VARS-226ENST00000483275 PMS2P2O95744 297 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 AK1P00568 194 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 IGFBP5P24593 272 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 IDH2P48735 452 aaKnown RBP12.18□□□□□ -0.46
VARS-226ENST00000483275 CLDN8P56748 225 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 PHC1P78364 1004 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 LGALS3BPQ08380 585 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 CARTPTQ16568 116 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 ELOA3BQ3SY89 546 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 GPAT3Q53EU6 434 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 HIKESHIQ53FT3 197 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 TSPO2Q5TGU0 170 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 BHLHB9Q6PI77 547 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 ANKS4BQ8N8V4 417 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 ELOA3Q8NG57 546 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 FBXO17Q96EF6 278 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 EXD2Q9NVH0 621 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 MOKQ9UQ07 419 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 MGAT4BQ9UQ53 548 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 SPIN1Q9Y657 262 aaPredicted RBP12.18□□□□□ -0.46
VARS-226ENST00000483275 TENM1Q9UKZ4 2725 aa12.18□□□□□ -0.46
VARS-226ENST00000483275 TMED7-TICAM2A0A0A6YYA0 188 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 WDR91A4D1P6 747 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 PDLIM1O00151 329 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 ERLIN1O75477 346 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 IMPDH2P12268 514 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 SLC25A16P16260 332 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 APOBEC1P41238 236 aaKnown RBP12.17□□□□□ -0.46
VARS-226ENST00000483275 SLC16A1P53985 500 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 NME5P56597 212 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 PDK3Q15120 406 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 ATAD3BQ5T9A4 648 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 GRINAQ7Z429 371 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 MREGQ8N565 214 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 ARFGAP2Q8N6H7 521 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 ANKFN1Q8N957 763 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 ZBTB9Q96C00 473 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 MUS81Q96NY9 551 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 SORCS2Q96PQ0 1159 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 SHARPINQ9H0F6 387 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 AKTIPQ9H8T0 292 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 SLC17A5Q9NRA2 495 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 NOP53Q9NZM5 478 aaKnown RBP12.17□□□□□ -0.46
VARS-226ENST00000483275 UPB1Q9UBR1 384 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 RAB21Q9UL25 225 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 SLC35A3Q9Y2D2 325 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 TMED7Q9Y3B3 224 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 HDGFL3Q9Y3E1 203 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 FLVCR1Q9Y5Y0 555 aa12.17□□□□□ -0.46
VARS-226ENST00000483275 DUXAA6NLW8 204 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 RNASET2O00584 256 aaKnown RBP12.16□□□□□ -0.46
VARS-226ENST00000483275 GPR171O14626 319 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 BPGMP07738 259 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 CHRM4P08173 479 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 USF1P22415 310 aaPredicted RBP12.16□□□□□ -0.46
VARS-226ENST00000483275 CHI3L1P36222 383 aaPredicted RBP12.16□□□□□ -0.46
VARS-226ENST00000483275 MAGEA8P43361 318 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 KHKP50053 298 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 EFNA4P52798 201 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 DSCR9P59020 149 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 TUBA1BP68363 451 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 TUBA4AP68366 448 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 EMX2Q04743 252 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 SYPL1Q16563 259 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 SPANXN4Q5MJ08 99 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 SAXO2Q658L1 398 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 CYB5R2Q6BCY4 276 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 TUBA1AQ71U36 451 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 DEPDC4Q8N2C3 294 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 NATD1Q8N6N6 113 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 ZNF781Q8N8C0 355 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 MIPOL1Q8TD10 442 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 SLC35A5Q9BS91 424 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 C19orf24Q9BVV8 132 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 TMEM181Q9P2C4 612 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 OSGIN1Q9UJX0 560 aa12.16□□□□□ -0.46
VARS-226ENST00000483275 IGHV4-61A0A0C4DH41 118 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 ANKRD28O15084 1053 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 SCN2BO60939 215 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 AKR7A3O95154 331 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 UQCRC2P22695 453 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 TACR3P29371 465 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 KCNJ10P78508 379 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 HPCAP84074 193 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 H3F3AP84243 136 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 MST1LQ2TV78 715 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 KRT71Q3SY84 523 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 OR7E24Q6IFN5 339 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 ZNF544Q6NX49 715 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 RNF130Q86XS8 419 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 PNPT1Q8TCS8 783 aaKnown RBP12.15□□□□□ -0.46
VARS-226ENST00000483275 ZNF385AQ96PM9 386 aaKnown RBP12.15□□□□□ -0.46
VARS-226ENST00000483275 PRR14Q9BWN1 585 aa12.15□□□□□ -0.46
VARS-226ENST00000483275 DPY30Q9C005 99 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms