RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 MGARPQ8TDB4 240 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 GTF2H4Q92759 462 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 KISS1RQ969F8 398 aaPredicted RBP8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 BOD1Q96IK1 185 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 C7orf26Q96N11 449 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 MUS81Q96NY9 551 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 CCL19Q99731 98 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 SMR3AQ99954 134 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 RSPO3Q9BXY4 272 aaPredicted RBP8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 GRIP2Q9C0E4 1043 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 OR11A1Q9GZK7 315 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 TPT1P8Q9HAU6 139 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 BCL2L10Q9HD36 194 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 NGBQ9NPG2 151 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 RLIMQ9NVW2 624 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 TMEM45AQ9NWC5 275 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 SPIN1Q9Y657 262 aaPredicted RBP8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 ZANQ9Y493 2812 aa8.59□□□□□ -1.03
TMEM39A-207ENST00000482162 TMED7-TICAM2A0A0A6YYA0 188 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 FAM234BA2RU67 622 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 CFAP73A6NFT4 308 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 OR5H1A6NKK0 313 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 GPR171O14626 319 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 POLR3GO15318 223 aaPredicted RBP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 EIF1BO60739 113 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 FZD7O75084 574 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 NPIPB7O75200 414 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 TGDSO95455 350 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 NR2F1P10589 423 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 KITP10721 976 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 IMPDH2P12268 514 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 ETFAP13804 333 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 IL32P24001 234 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 TACR3P29371 465 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 MDH1P40925 334 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 POLR2HP52434 150 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 GNA13Q14344 377 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 SLC17A1Q14916 467 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 MRPL2Q5T653 305 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 RNF220Q5VTB9 566 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 PRAMEF8Q5VWM4 474 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 PRAMEF7Q5VXH5 474 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 YTHDF3Q7Z739 585 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 P3H2Q8IVL5 708 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 FUNDC1Q8IVP5 155 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 ZIC4Q8N9L1 334 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 OR9I1Q8NGQ6 314 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 ZNF563Q8TA94 476 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 PIGXQ8TBF5 258 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 AKAP1Q92667 903 aaKnown RBP eCLIP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 SLC35B4Q969S0 331 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 VPS33AQ96AX1 596 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 ZNF775Q96BV0 537 aaPredicted RBP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 ITCHQ96J02 903 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 BDH2Q9BUT1 245 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 TRIM2Q9C040 744 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 AMBRA1Q9C0C7 1298 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 PAIP1Q9H074 479 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 PIF1Q9H611 641 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 ESRP2Q9H6T0 727 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 THUMPD1Q9NXG2 353 aaKnown RBP8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 CALML5Q9NZT1 146 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 EMC3Q9P0I2 261 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 MALT1Q9UDY8 824 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 TMED7Q9Y3B3 224 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 RNF115Q9Y4L5 304 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 ALPK2Q86TB3 2170 aa8.58□□□□□ -1.04
TMEM39A-207ENST00000482162 JMJD1CQ15652 2540 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 HIVEP2P31629 2446 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 A0A0G2JPF8 293 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 TMEM72A0PK05 275 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 ZC3H12DA2A288 527 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 HNRNPCL2B2RXH8 293 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 HNRNPCL3B7ZW38 293 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 UBDO15205 165 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 HNRNPCL1O60812 293 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 HEXAP06865 529 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 HNRNPCL4P0DMR1 293 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 TFPIP10646 304 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 IL7RP16871 459 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 IDH3AP50213 366 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 P2RY4P51582 365 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 POLR2JP52435 117 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 SLC35A1P78382 337 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 HPCAP84074 193 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 GTDC1Q4AE62 458 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 LRIF1Q5T3J3 769 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 BLOC1S3Q6QNY0 202 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 PAQR6Q6TCH4 344 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 DNM1P46Q6ZS02 220 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 ATG4DQ86TL0 474 aaPredicted RBP8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 CCDC103Q8IW40 242 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 PEX5LQ8IYB4 626 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 ZNF100Q8IYN0 542 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 MIER2Q8N344 545 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 CLIP4Q8N3C7 705 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 OR52P1PQ8NH57 321 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 PNPT1Q8TCS8 783 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 LRRC8CQ8TDW0 803 aa8.57□□□□□ -1.04
TMEM39A-207ENST00000482162 WDR60Q8WVS4 1066 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms