RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ZNF861PO60384 105 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 ZNF780AO75290 641 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-210ENST00000482158 MTX2O75431 263 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 SUPT7LO94864 414 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 STAMBPO95630 424 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 GPR89BP0CG08 455 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 ZNF763Q0D2J5 394 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 KLRB1Q12918 225 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 IL24Q13007 206 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 PSG7Q13046 419 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 ARL6IP1Q15041 203 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 SFT2D3Q587I9 215 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 OR4F3Q6IEY1 312 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 TMEM110Q86TL2 294 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 SLC35F2Q8IXU6 374 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 EFHD2Q96C19 240 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-210ENST00000482158 PSKH2Q96QS6 385 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 NYAP2Q9P242 653 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 PRPF19Q9UMS4 504 aaKnown RBP3.86□□□□□ -1.79
SF3B1-210ENST00000482158 ATAD2BQ9ULI0 1458 aa3.86□□□□□ -1.79
SF3B1-210ENST00000482158 GTF3C1Q12789 2109 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 LTBP1Q14766 1721 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 C15orf38-AP3S2A0A0A6YYH1 394 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 IGKV6D-41A0A0C4DH26 115 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 USP27XA6NNY8 438 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 SNAPINO95295 136 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 HPNP05981 417 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 ZNF853P0CG23 659 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 NCK1P16333 377 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 GABRR1P24046 479 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 HTR1FP30939 366 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 GRIA1P42261 906 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 ACTR1AP61163 376 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 CSNK1G2P78368 415 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 TLE4Q04727 773 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 ORC2Q13416 577 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-210ENST00000482158 ZNF630Q2M218 657 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-210ENST00000482158 ZSCAN25Q6NSZ9 544 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 PRSS41Q7RTY9 318 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 Q8N7P7 452 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 HTR3CQ8WXA8 447 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 DCUN1D4Q92564 292 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 SLC41A3Q96GZ6 507 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 MTMR9Q96QG7 549 aa3.85□□□□□ -1.79
SF3B1-210ENST00000482158 SECISBP2Q96T21 854 aaKnown RBP3.85□□□□□ -1.79
SF3B1-210ENST00000482158 RAMP3O60896 148 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 BBOX1O75936 387 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 AP2A1O95782 977 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 KRT6AP02538 564 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 CALCRP30988 508 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 UGT1A5P35504 534 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 PRPHP41219 470 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 QARSP47897 775 aaKnown RBP3.84□□□□□ -1.79
SF3B1-210ENST00000482158 KLK7P49862 253 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 CKAP4Q07065 602 aaKnown RBP3.84□□□□□ -1.79
SF3B1-210ENST00000482158 DAZ2Q13117 558 aaKnown RBP3.84□□□□□ -1.79
SF3B1-210ENST00000482158 RIPK1Q13546 671 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 VGLL4Q14135 290 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 PDK3Q15120 406 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 SLC15A2Q16348 729 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 CARD16Q5EG05 197 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 C1orf146Q5VVC0 180 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 C11orf71Q6IPW1 123 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 RFLNAQ6ZTI6 216 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 NKAPP1Q8N9T2 125 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 MFSD9Q8NBP5 474 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 ZNF740Q8NDX6 193 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 OR5D13Q8NGL4 314 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 RPUSD4Q96CM3 377 aaKnown RBP3.84□□□□□ -1.79
SF3B1-210ENST00000482158 PKNOX2Q96KN3 472 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 SLC38A2Q96QD8 506 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 NPAS2Q99743 824 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 TMEM43Q9BTV4 400 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 CAPS2Q9BXY5 557 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 VCX2Q9H322 139 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 SUDS3Q9H7L9 328 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-210ENST00000482158 DAZ3Q9NR90 486 aaKnown RBP3.84□□□□□ -1.79
SF3B1-210ENST00000482158 TREM2Q9NZC2 230 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 ADAM22Q9P0K1 906 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 STAP1Q9ULZ2 295 aa3.84□□□□□ -1.79
SF3B1-210ENST00000482158 PHF3Q92576 2039 aaKnown RBP3.83□□□□□ -1.8
SF3B1-210ENST00000482158 IGHV3OR16-13A0A075B7E8 117 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 IGHV1OR21-1A0A087WYE8 117 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 GFYI3L273 518 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 RGS16O15492 202 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-210ENST00000482158 POU2F1P14859 743 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 HMGB2P26583 209 aaKnown RBP3.83□□□□□ -1.8
SF3B1-210ENST00000482158 DDOSTP39656 456 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 DUSP3P51452 185 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-210ENST00000482158 DPYSL2Q16555 572 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 EXOC3L2Q2M3D2 409 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 BCL7AQ4VC05 210 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 C2orf83Q53S99 150 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 Q6ZPB1 254 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-210ENST00000482158 RDH10Q8IZV5 341 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 ZCCHC7Q8N3Z6 543 aaKnown RBP3.83□□□□□ -1.8
SF3B1-210ENST00000482158 C20orf203Q8NBC4 194 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 OR4K14Q8NGD5 310 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 NEIL3Q8TAT5 605 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 BRSK1Q8TDC3 778 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms