RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ZNF550Q7Z398 422 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 P4HA3Q7Z4N8 544 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 ATG4DQ86TL0 474 aaPredicted RBP9.46□□□□□ -0.9
SSBP1-210ENST00000481508 ZNF440Q8IYI8 595 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 MICU2Q8IYU8 434 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 CCDC197Q8NCU1 140 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 OR2T12Q8NG77 320 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 ASB5Q8WWX0 329 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 TMEM234Q8WY98 164 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 ZNF607Q96SK3 696 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 ARHGDIGQ99819 225 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 SH3GL1Q99961 368 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 SPATA5L1Q9BVQ7 753 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 RNF122Q9H9V4 155 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 COQ3Q9NZJ6 369 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 ABCD2Q9UBJ2 740 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 TMED7Q9Y3B3 224 aa9.46□□□□□ -0.9
SSBP1-210ENST00000481508 A0A1B0GWA3 101 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 A0A1W2PNV4 684 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 PRORSD1PA6NEY8 169 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 HSPB2A8KAH6 182 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 ST8SIA5O15466 376 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 HNRNPRO43390 633 aaKnown RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 RAMP1O60894 148 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 LGI1O95970 557 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 IL2RAP01589 272 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 THY1P04216 161 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 T-ENOLP0DO92 83 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 TFPIP10646 304 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 NCK1P16333 377 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 CTSSP25774 331 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 APOBEC1P41238 236 aaKnown RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 SLC1A3P43003 542 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 KIR2DL2P43627 348 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 CARD18P57730 90 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 EEFSECP57772 596 aaKnown RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 RPS3AP61247 264 aaKnown RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 MYBPHQ13203 477 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 SNTB1Q13884 538 aaKnown RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 HSPB2Q16082 182 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 SGCBQ16585 318 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 NRF1Q16656 503 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 LRRC23Q53EV4 343 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 CHMP1BQ7LBR1 199 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 ARPINQ7Z6K5 226 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 PATL1Q86TB9 770 aaKnown RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 SLC30A8Q8IWU4 369 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 RNF148Q8N7C7 305 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 FAM156AQ8NDB6 213 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 OR6T1Q8NGN1 323 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 VANGL1Q8TAA9 524 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 CA5BP1Q8WTZ4 195 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 ABHD3Q8WU67 409 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 HOPXQ9BPY8 73 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 ALG2Q9H553 416 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 CACYBPQ9HB71 228 aaKnown RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 TMEM181Q9P2C4 612 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 ING1Q9UK53 422 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-210ENST00000481508 ZNF175Q9Y473 711 aa9.45□□□□□ -0.9
SSBP1-210ENST00000481508 IGKV1D-42A0A075B6H8 117 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 ELOVL7A1L3X0 281 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 SYT5O00445 386 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 SMAD9O15198 467 aaKnown RBP9.44□□□□□ -0.9
SSBP1-210ENST00000481508 SERPINB7O75635 380 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 LYPD3O95274 346 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 FESP07332 822 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 FUT4P22083 530 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 SLC7A1P30825 629 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 KDELR2P33947 212 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 CPOXP36551 454 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 DIO1P49895 249 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 RGS8P57771 180 aaPredicted RBP9.44□□□□□ -0.9
SSBP1-210ENST00000481508 VEZF1Q14119 521 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 KRT72Q14CN4 511 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 SF3B4Q15427 424 aaKnown RBP eCLIP9.44□□□□□ -0.95e-6■■□□□ 12.9
SSBP1-210ENST00000481508 OR1Q1Q15612 314 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 ZSWIM7Q19AV6 140 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 CYBRD1Q53TN4 286 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 WBP2NLQ6ICG8 309 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 ERICH5Q6P6B1 374 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 WDR88Q6ZMY6 472 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 RINLQ6ZS11 566 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 TMPPEQ6ZT21 453 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 BTLAQ7Z6A9 289 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 P3H2Q8IVL5 708 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 RBM15BQ8NDT2 890 aaKnown RBP9.44□□□□□ -0.9
SSBP1-210ENST00000481508 OR52E4Q8NGH9 312 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 BCAS4Q8TDM0 211 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 RNF128Q8TEB7 428 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 NANOS1Q8WY41 292 aaKnown RBP9.44□□□□□ -0.9
SSBP1-210ENST00000481508 SLC35B4Q969S0 331 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 TM9SF2Q99805 663 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 SERINC1Q9NRX5 453 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 JKAMPQ9P055 326 aa9.44□□□□□ -0.9
SSBP1-210ENST00000481508 TESQ9UGI8 421 aaKnown RBP9.44□□□□□ -0.9
SSBP1-210ENST00000481508 KLF2Q9Y5W3 355 aaPredicted RBP9.44□□□□□ -0.9
SSBP1-210ENST00000481508 FLNAP21333 2647 aaKnown RBP9.43□□□□□ -0.9
SSBP1-210ENST00000481508 A0A0B4J2E0 115 aa9.43□□□□□ -0.9
SSBP1-210ENST00000481508 A0A1B0GX12 115 aa9.43□□□□□ -0.9
SSBP1-210ENST00000481508 CPSF4LA6NMK7 179 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms