RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PAGE3Q5JUK9 113 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 LRIF1Q5T3J3 769 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 SLC22A10Q63ZE4 541 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 TNFAIP8L2Q6P589 184 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 RFPL4BQ6ZWI9 263 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 NUP54Q7Z3B4 507 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CARM1Q86X55 608 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 RNF130Q86XS8 419 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 PRR22Q8IZ63 422 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 BCL6BQ8N143 479 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 DPP10Q8N608 796 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 OR52N2Q8NGI0 321 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 FBXO30Q8TB52 745 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ZFP90Q8TF47 636 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 RAB2BQ8WUD1 216 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 XAGE5Q8WWM1 108 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CDS1Q92903 461 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 TMBIM1Q969X1 311 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 DACT3Q96B18 629 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 DUS3LQ96G46 650 aaKnown RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 RMND5BQ96G75 393 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF597Q96LX8 424 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 COL21A1Q96P44 957 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 SORCS2Q96PQ0 1159 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 OR7D2Q96RA2 312 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 SECISBP2Q96T21 854 aaKnown RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 NPAS2Q99743 824 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CIB1Q99828 191 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 HOPXQ9BPY8 73 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 THUMPD3Q9BV44 507 aaKnown RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ADI1Q9BV57 179 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ANKRD60Q9BZ19 345 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 KCNN2Q9H2S1 579 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 OR51I1Q9H343 314 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 METTL7AQ9H8H3 244 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 TRIM45Q9H8W5 580 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 TPT1P8Q9HAU6 139 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 IL1RL2Q9HB29 575 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ZBTB20Q9HC78 741 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 SERHLQ9NQF3 203 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF71Q9NQZ8 489 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 SDHAF3Q9NRP4 125 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 SACM1LQ9NTJ5 587 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ANKRD10Q9NXR5 420 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 PLA2G3Q9NZ20 509 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 KLRF1Q9NZS2 232 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CNIH4Q9P003 139 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 Q9UFV3 132 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CDC42EP3Q9UKI2 254 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 LIPT1Q9Y234 373 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 DTX4Q9Y2E6 619 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 TNRC6AQ8NDV7 1962 aaKnown RBP5.65□□□□□ -1.51
SF3B1-209ENST00000479532 FREM2Q5SZK8 3169 aa5.65□□□□□ -1.51
SF3B1-209ENST00000479532 IGF2RP11717 2491 aa5.65□□□□□ -1.51
SF3B1-209ENST00000479532 EXPH5Q8NEV8 1989 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 NUP214P35658 2090 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-209ENST00000479532 ASPDHA6ND91 283 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 TMEM200CA6NKL6 621 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 C5orf58C9J3I9 102 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 H3BSA7 217 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 AIM2O14862 343 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 NDUFA2O43678 99 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 TSPAN2O60636 221 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 STX11O75558 287 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 CYP7B1O75881 506 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 CLPXO76031 633 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 RASAL1O95294 804 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 NADKO95544 446 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-209ENST00000479532 F10P00742 488 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PLA2G1BP04054 148 aaKnown RBP5.64□□□□□ -1.51
SF3B1-209ENST00000479532 HMGN1P05114 100 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 SP1P08047 785 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 OR12D1P0DN82 309 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 NR2F1P10589 423 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 ACP2P11117 423 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PEX2P28328 305 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 CPOXP36551 454 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 NUDT2P50583 147 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 TNFSF10P50591 281 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 FBXW4P57775 412 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PPP2R2BQ00005 443 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PSG6Q00889 435 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 IFITM2Q01629 132 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 SNTA1Q13424 505 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 RGNQ15493 299 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 TRIP10Q15642 601 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 DUSP5Q16690 384 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 CYP51A1Q16850 503 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF791Q3KP31 576 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-209ENST00000479532 ARHGAP11BQ3KRB8 267 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 C3orf36Q3SXR2 165 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 FLYWCH1Q4VC44 716 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 RUNDC3AQ59EK9 446 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 DCST2Q5T1A1 773 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.64□□□□□ -1.51
SF3B1-209ENST00000479532 GCNT6Q5T4J0 391 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 SPINK14Q6IE38 97 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 SLC25A25Q6KCM7 469 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 C16orf89Q6UX73 402 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 CCBE1Q6UXH8 406 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms