RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ELOA3BQ3SY89 546 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 FBXL19-AS1Q494R0 122 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 LSMEM1Q8N8F7 131 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 ELOA3Q8NG57 546 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 RNASE6Q93091 150 aaKnown RBP18.32■□□□□ 0.52
VARS-224ENST00000479051 C3orf49Q96BT1 292 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 ARHGDIGQ99819 225 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 POTEKPQ9BYX7 375 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 OR11A1Q9GZK7 315 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 ALG2Q9H553 416 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 C12orf10Q9HB07 376 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 SLC24A3Q9HC58 644 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 GP6Q9HCN6 339 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 NDE1Q9NXR1 346 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 KLHL9Q9P2J3 617 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 TRAPPC4Q9Y296 219 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 INTS1Q8N201 2190 aaKnown RBP18.31■□□□□ 0.52
VARS-224ENST00000479051 A8MVM7 634 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 NME4O00746 187 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 MSTNO14793 375 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 FMO6PO60774 539 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 SS18L1O75177 396 aaPredicted RBP18.31■□□□□ 0.52
VARS-224ENST00000479051 SMNDC1O75940 238 aaKnown RBP eCLIP18.31■□□□□ 0.52
VARS-224ENST00000479051 PRKD3O94806 890 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 FESP07332 822 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 PNMTP11086 282 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 UQCRC1P31930 480 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 KIR2DL2P43627 348 aaPredicted RBP18.31■□□□□ 0.52
VARS-224ENST00000479051 OR2B6P58173 313 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 SLC35A1P78382 337 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 KRT72Q14CN4 511 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 NRF1Q16656 503 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 LRRC23Q53EV4 343 aaPredicted RBP18.31■□□□□ 0.52
VARS-224ENST00000479051 TMEM201Q5SNT2 666 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 HIST2H2BCQ6DN03 193 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 ULK3Q6PHR2 472 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 MEX3BQ6ZN04 569 aaKnown RBP18.31■□□□□ 0.52
VARS-224ENST00000479051 COMTD1Q86VU5 262 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 OR6K3Q8NGY3 331 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 ARL5BQ96KC2 179 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 KCTD14Q9BQ13 255 aaPredicted RBP18.31■□□□□ 0.52
VARS-224ENST00000479051 SPOCK3Q9BQ16 436 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 RSPO3Q9BXY4 272 aaPredicted RBP18.31■□□□□ 0.52
VARS-224ENST00000479051 NPDC1Q9NQX5 325 aaPredicted RBP18.31■□□□□ 0.52
VARS-224ENST00000479051 PROCRQ9UNN8 238 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 USP22Q9UPT9 525 aa18.31■□□□□ 0.52
VARS-224ENST00000479051 A0A1B0GWA3 101 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 M0R3H8 397 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 EIF1BO60739 113 aaKnown RBP18.3■□□□□ 0.52
VARS-224ENST00000479051 GPIP06744 558 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 CD247P20963 164 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 HTR2AP28223 471 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 KDELR2P33947 212 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 IDUAP35475 653 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 MXRA7P84157 204 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 GUSBP1Q15486 140 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 ALG10BQ5I7T1 473 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 VWA1Q6PCB0 445 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 LUZP2Q86TE4 346 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 ATG4DQ86TL0 474 aaPredicted RBP18.3■□□□□ 0.52
VARS-224ENST00000479051 KIF18BQ86Y91 864 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 GPR32P1Q8NGA4 272 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 RNF217Q8TC41 542 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 ABHD3Q8WU67 409 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 LZICQ8WZA0 190 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 STARD4Q96DR4 205 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 SLC47A1Q96FL8 570 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 MCHR1Q99705 422 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 NAA11Q9BSU3 229 aaPredicted RBP18.3■□□□□ 0.52
VARS-224ENST00000479051 RBM24Q9BX46 236 aaKnown RBP18.3■□□□□ 0.52
VARS-224ENST00000479051 TAPBPLQ9BX59 468 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 ENKD1Q9H0I2 346 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 ARL8BQ9NVJ2 186 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 ADA2Q9NZK5 511 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 JKAMPQ9P055 326 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 ABCD2Q9UBJ2 740 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 CLEC4AQ9UMR7 237 aa18.3■□□□□ 0.52
VARS-224ENST00000479051 IGHV3-15A0A0B4J1V0 119 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 CYTIPO60759 359 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 CD8BP10966 210 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 GSK3BP49841 420 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 RASGEF1BQ0VAM2 473 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 OR1Q1Q15612 314 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 SWT1Q5T5J6 900 aaKnown RBP18.29■□□□□ 0.52
VARS-224ENST00000479051 C5orf46Q6UWT4 87 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 C6orf89Q6UWU4 347 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 C16orf89Q6UX73 402 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 BTLAQ7Z6A9 289 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 FITM2Q8N6M3 262 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 VANGL1Q8TAA9 524 aaPredicted RBP18.29■□□□□ 0.52
VARS-224ENST00000479051 PIGXQ8TBF5 258 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 BCAS4Q8TDM0 211 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 STK35Q8TDR2 534 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 FANCFQ9NPI8 374 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 ADPRHL2Q9NX46 363 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 KLHL13Q9P2N7 655 aa18.29■□□□□ 0.52
VARS-224ENST00000479051 ZC3H12DA2A288 527 aaKnown RBP18.28■□□□□ 0.52
VARS-224ENST00000479051 A8MXE2 369 aa18.28■□□□□ 0.52
VARS-224ENST00000479051 CXCR6O00574 342 aa18.28■□□□□ 0.52
VARS-224ENST00000479051 SMAD9O15198 467 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms