RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 TEPSINQ96N21 525 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 MARCH5Q9NX47 278 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 MTCL1Q9Y4B5 1905 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 RUSC2Q8N2Y8 1516 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 RCCD1A6NED2 376 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 LGALS8O00214 317 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 GALR2O43603 387 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 NOBOXO60393 691 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SLC43A1O75387 559 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 HPRP00739 348 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 ADH5P11766 374 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 HLA-FP30511 346 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 BSGP35613 385 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 TPPP2P59282 170 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 RPS13P62277 151 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 DGKZQ13574 1117 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 TRMT12Q53H54 448 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 OR2T5Q6IEZ7 315 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 RGS7BPQ6MZT1 257 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 PSAPL1Q6NUJ1 521 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 PCDH20Q8N6Y1 951 aaKnown RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 NKAIN3Q8N8D7 197 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 OR6N2Q8NGY6 317 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 OR2T29Q8NH02 315 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 GRHL3Q8TE85 626 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 GNPNAT1Q96EK6 184 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 GABARAPL1Q9H0R8 117 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 ABCG5Q9H222 651 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SEMA6AQ9H2E6 1030 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 POT1Q9NUX5 634 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 SPATA6Q9NWH7 488 aaPredicted RBP5.11□□□□□ -1.59
USF3-202ENST00000478658 WASHC3Q9Y3C0 194 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 B3GALT1Q9Y5Z6 326 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 CPDO75976 1380 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 KNL1Q8NG31 2342 aa5.11□□□□□ -1.59
USF3-202ENST00000478658 TNFRSF10AO00220 468 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ZNF254O75437 659 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 EPOP01588 193 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 HIST1H1EP10412 219 aaKnown RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 ZNF17P17021 662 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ZNF93P35789 620 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 PREPP48147 710 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 LSSP48449 732 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 TNFSF10P50591 281 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 RHOBP62745 196 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ATP6V1FQ16864 119 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SLC35G1Q2M3R5 365 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 MSS51Q4VC12 460 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ACSM5Q6NUN0 579 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.1□□□□□ -1.59
USF3-202ENST00000478658 OR4F6Q8NGB9 312 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 OR52E2Q8NGJ4 325 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 NEIL3Q8TAT5 605 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ZCCHC10Q8TBK6 192 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SLC38A5Q8WUX1 472 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PIWIL1Q96J94 861 aaKnown RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 SENP8Q96LD8 212 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PACRGQ96M98 296 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 SLC6A18Q96N87 628 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 LPAR4Q99677 370 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 A8MUI8 341 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ZNF587BE7ETH6 402 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 M0QZK8 103 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 EIF1BO60739 113 aaKnown RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 GGCTO75223 188 aaKnown RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 ABHD16AO95870 558 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ZNF688P0C7X2 276 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SELPP16109 830 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ZNF26P17031 533 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 BAXQ07812 192 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 GPR19Q15760 415 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 KCTD11Q693B1 232 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 EDARADDQ8WWZ3 215 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 GSX1Q9H4S2 264 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 NID2Q14112 1375 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ZNF609O15014 1411 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 LOC102724200A0A096LPH7 203 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 GPR171O14626 319 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 INSIG1O15503 277 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 LILRB3O75022 631 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 IGHG1P01857 330 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 POU3F2P20265 443 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 SREBF1P36956 1147 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 LRRC10Q5BKY1 277 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ZNF429Q86V71 674 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 CLIP4Q8N3C7 705 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PERPQ96FX8 193 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 TNFRSF13CQ96RJ3 184 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 SLC25A51Q9H1U9 297 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 GSTO2Q9H4Y5 243 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 UBE2ZQ9H832 354 aaPredicted RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 OR2S2Q9NQN1 319 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 LRIT1Q9P2V4 623 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 TESQ9UGI8 421 aaKnown RBP5.1□□□□□ -1.59
USF3-202ENST00000478658 ARHGEF5Q12774 1597 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 PSMB10P40306 273 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 RAD52P43351 418 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 RFX2P48378 723 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 UNQ9370/PRO34162Q6UXP9 181 aa5.1□□□□□ -1.59
USF3-202ENST00000478658 ZNF836Q6ZNA1 936 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms