RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 TGM6O95932 706 aa24■■□□□ 1.43
CCM2-211ENST00000478582 RAC3P60763 192 aa24■■□□□ 1.43
CCM2-211ENST00000478582 PON3Q15166 354 aa24■■□□□ 1.43
CCM2-211ENST00000478582 HSPB2Q16082 182 aa24■■□□□ 1.43
CCM2-211ENST00000478582 ZNF613Q6PF04 617 aa24■■□□□ 1.43
CCM2-211ENST00000478582 TMPPEQ6ZT21 453 aa24■■□□□ 1.43
CCM2-211ENST00000478582 CARM1Q86X55 608 aa24■■□□□ 1.43
CCM2-211ENST00000478582 RBM45Q8IUH3 476 aaKnown RBP24■■□□□ 1.43
CCM2-211ENST00000478582 C9orf106Q8NAJ2 232 aa24■■□□□ 1.43
CCM2-211ENST00000478582 OR10Q1Q8NGQ4 319 aa24■■□□□ 1.43
CCM2-211ENST00000478582 VANGL1Q8TAA9 524 aaPredicted RBP24■■□□□ 1.43
CCM2-211ENST00000478582 CA5BP1Q8WTZ4 195 aa24■■□□□ 1.43
CCM2-211ENST00000478582 ASB5Q8WWX0 329 aa24■■□□□ 1.43
CCM2-211ENST00000478582 CPNE4Q96A23 557 aaPredicted RBP24■■□□□ 1.43
CCM2-211ENST00000478582 SLC7A6OSQ96CW6 309 aaPredicted RBP24■■□□□ 1.43
CCM2-211ENST00000478582 DDIT4LQ96D03 193 aa24■■□□□ 1.43
CCM2-211ENST00000478582 OR5B2Q96R09 309 aa24■■□□□ 1.43
CCM2-211ENST00000478582 POTEKPQ9BYX7 375 aa24■■□□□ 1.43
CCM2-211ENST00000478582 Q9UFV3 132 aa24■■□□□ 1.43
CCM2-211ENST00000478582 RNF6Q9Y252 685 aa24■■□□□ 1.43
CCM2-211ENST00000478582 CRYBG3Q68DQ2 2970 aa24■■□□□ 1.43
CCM2-211ENST00000478582 A0A1W2PNR3 127 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 SERPINA1P01009 418 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 CCNA2P20248 432 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 SWT1Q5T5J6 900 aaKnown RBP23.99■■□□□ 1.43
CCM2-211ENST00000478582 SLC38A4Q969I6 547 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 SLC47A1Q96FL8 570 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 TPD52L3Q96J77 140 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 ARL5BQ96KC2 179 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 OR11A1Q9GZK7 315 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 DCAF13Q9NV06 445 aaKnown RBP23.99■■□□□ 1.43
CCM2-211ENST00000478582 RPS6KA6Q9UK32 745 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 MCTS1Q9ULC4 181 aaKnown RBP23.99■■□□□ 1.43
CCM2-211ENST00000478582 TRAPPC4Q9Y296 219 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 ARHGAP21Q5T5U3 1957 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 CACNA1CQ13936 2221 aa23.99■■□□□ 1.43
CCM2-211ENST00000478582 CELSR2Q9HCU4 2923 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 A8MVM7 634 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 SYNGR4O95473 234 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 TFPIP10646 304 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 PNMTP11086 282 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 FCGR2AP12318 317 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 BNIP2Q12982 314 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 ALG10BQ5I7T1 473 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 ENTPD8Q5MY95 495 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 PLXDC2Q6UX71 529 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 FNDC9Q8TBE3 224 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 SRXN1Q9BYN0 137 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 POLR2J2Q9GZM3 115 aaKnown RBP23.98■■□□□ 1.43
CCM2-211ENST00000478582 POLR2J3Q9H1A7 115 aaKnown RBP23.98■■□□□ 1.43
CCM2-211ENST00000478582 RNF122Q9H9V4 155 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 SNX13Q9Y5W8 968 aa23.98■■□□□ 1.43
CCM2-211ENST00000478582 NPIPB7O75200 414 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 PMS2P2O95744 297 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 ZNF682O95780 498 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 TNFRSF1BP20333 461 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 CHRNB4P30926 498 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 DIO1P49895 249 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 CSNK2A1P68400 391 aaPredicted RBP23.97■■□□□ 1.43
CCM2-211ENST00000478582 CENPEQ02224 2701 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 MYBPHQ13203 477 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 ZNF239Q16600 458 aaKnown RBP23.97■■□□□ 1.43
CCM2-211ENST00000478582 OR2A2Q6IF42 318 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 P4HA3Q7Z4N8 544 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 NAXEQ8NCW5 288 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 STK35Q8TDR2 534 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 SELENONQ9NZV5 590 aa23.97■■□□□ 1.43
CCM2-211ENST00000478582 KIAA1549Q9HCM3 1950 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 A0A087WUJ7 227 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 ZC3H12DA2A288 527 aaKnown RBP23.96■■□□□ 1.43
CCM2-211ENST00000478582 ELOA3DA6NLF2 546 aaPredicted RBP23.96■■□□□ 1.43
CCM2-211ENST00000478582 SULT2B1O00204 365 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 DNPH1O43598 174 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 ATP5HO75947 161 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 CRHP06850 196 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 MSX2P35548 267 aaPredicted RBP23.96■■□□□ 1.43
CCM2-211ENST00000478582 OR1E2P47887 323 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 CDH12P55289 794 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 ELOA3BQ3SY89 546 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 DNAL1Q4LDG9 190 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 VTCN1Q7Z7D3 282 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 CCDC71Q8IV32 467 aaPredicted RBP23.96■■□□□ 1.43
CCM2-211ENST00000478582 ELOA3Q8NG57 546 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 LILRB4Q8NHJ6 448 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 ADAMTS16Q8TE57 1224 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 BTBD10Q9BSF8 475 aa23.96■■□□□ 1.43
CCM2-211ENST00000478582 ZNF629Q9UEG4 869 aaPredicted RBP23.96■■□□□ 1.43
CCM2-211ENST00000478582 SAMD4AQ9UPU9 718 aaKnown RBP23.96■■□□□ 1.43
CCM2-211ENST00000478582 NOTCH2Q04721 2471 aa23.95■■□□□ 1.43
CCM2-211ENST00000478582 TRAPPC13A5PLN9 417 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 CPSF4LA6NMK7 179 aaKnown RBP23.95■■□□□ 1.42
CCM2-211ENST00000478582 C19orf84I3L1E1 186 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 ARPC2O15144 300 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 GYG2O15488 501 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 AQP8O94778 261 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 IL18BPO95998 194 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 CTSSP25774 331 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 CBX1P83916 185 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 IFI44LQ53G44 452 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 C5orf46Q6UWT4 87 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms