RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 GTSCR1Q86UQ5 136 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 SLC22A16Q86VW1 577 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 RPS19BP1Q86WX3 136 aaKnown RBP3.84□□□□□ -1.79
VPS50-214ENST00000477935 PRSS58Q8IYP2 241 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 TEX26Q8N6G2 289 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 CCDC89Q8N998 374 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 THAP8Q8NA92 274 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 RELL2Q8NC24 303 aaPredicted RBP3.84□□□□□ -1.79
VPS50-214ENST00000477935 GPR26Q8NDV2 337 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 OR52E1Q8NGJ3 308 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 OR5M9Q8NGP3 310 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 OR13C3Q8NGS6 347 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.84□□□□□ -1.79
VPS50-214ENST00000477935 ATL1Q8WXF7 558 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 RBM41Q96IZ5 413 aaKnown RBP3.84□□□□□ -1.79
VPS50-214ENST00000477935 ZNF285Q96NJ3 590 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 SMIM14Q96QK8 99 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 RBM4BQ9BQ04 359 aaKnown RBP3.84□□□□□ -1.79
VPS50-214ENST00000477935 TDRD1Q9BXT4 1180 aaKnown RBP3.84□□□□□ -1.79
VPS50-214ENST00000477935 DEFB127Q9H1M4 99 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 ZDHHC11Q9H8X9 412 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 NKIRAS2Q9NYR9 191 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 ZNF226Q9NYT6 803 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 TRPC4Q9UBN4 977 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 CHKBQ9Y259 395 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 PPP2R2CQ9Y2T4 447 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 ANGPTL3Q9Y5C1 460 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 NUP210LQ5VU65 1888 aa3.84□□□□□ -1.8
VPS50-214ENST00000477935 A0A1W2PPQ1 181 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 SYNDIG1LA6NDD5 238 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 UBE2CO00762 179 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 NDC80O14777 642 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 CDK2AP2O75956 126 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 NXPH2O95156 264 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 GNA14O95837 355 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 EPPINO95925 133 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 ERCC2P18074 760 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 MC5RP33032 325 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 EFNA3P52797 238 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 MTTPP55157 894 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 PPIAP62937 165 aaKnown RBP3.83□□□□□ -1.8
VPS50-214ENST00000477935 RPA4Q13156 261 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 IHHQ14623 411 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 SIX1Q15475 284 aaPredicted RBP3.83□□□□□ -1.8
VPS50-214ENST00000477935 CAMK4Q16566 473 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 RESP18Q5W5W9 173 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 KCTD11Q693B1 232 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 CYB5R2Q6BCY4 276 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 GPR139Q6DWJ6 353 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 PRR27Q6MZM9 219 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 FAM173BQ6P4H8 233 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 SLC25A47Q6Q0C1 308 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 BTN2A1Q7KYR7 527 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 PSTKQ8IV42 348 aaKnown RBP3.83□□□□□ -1.8
VPS50-214ENST00000477935 MMD2Q8IY49 270 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 FBXW8Q8N3Y1 598 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 RASGEF1AQ8N9B8 481 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 LPCAT1Q8NF37 534 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 VANGL1Q8TAA9 524 aaPredicted RBP3.83□□□□□ -1.8
VPS50-214ENST00000477935 SMAP2Q8WU79 429 aaPredicted RBP3.83□□□□□ -1.8
VPS50-214ENST00000477935 SLCO2A1Q92959 643 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 THOC1Q96FV9 657 aaKnown RBP3.83□□□□□ -1.8
VPS50-214ENST00000477935 C10orf90Q96M02 699 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 SERINC2Q96SA4 455 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 CYTH2Q99418 400 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 KRT12Q99456 494 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 SELENOSQ9BQE4 189 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 CABLES2Q9BTV7 478 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 TXLNGYQ9BZA5 131 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 NOL11Q9H8H0 719 aaKnown RBP3.83□□□□□ -1.8
VPS50-214ENST00000477935 NT5MQ9NPB1 228 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 PPANQ9NQ55 473 aaKnown RBP3.83□□□□□ -1.8
VPS50-214ENST00000477935 FREM1Q5H8C1 2179 aa3.83□□□□□ -1.8
VPS50-214ENST00000477935 TMEM89A2RUT3 159 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 URADA6NGE7 173 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 OR2AG2A6NM03 316 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 UBFD1O14562 309 aaKnown RBP3.82□□□□□ -1.8
VPS50-214ENST00000477935 EPHB6O15197 1021 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 UGT1A9O60656 530 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 HCN1O60741 890 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 ANXA5P08758 320 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 SERPINB6P35237 376 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 HMGCLP35914 325 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 SLC26A3P40879 764 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 OPRL1P41146 370 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 CASP9P55211 416 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 PAX9P55771 341 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 VLDLRP98155 873 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 SLC10A1Q14973 349 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 TMEM249Q2WGJ8 235 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 CCDC40Q4G0X9 1142 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 BCL7AQ4VC05 210 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 SLC35D3Q5M8T2 416 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 ERMARDQ5T6L9 678 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 LCN1P1Q5VSP4 162 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 TRIM65Q6PJ69 517 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 WDR59Q6PJI9 974 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 FAM71AQ8IYT1 594 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 ATPAF2Q8N5M1 289 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 TC2NQ8N9U0 490 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms