RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 M0R233 179 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 NR5A2O00482 541 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 TP73O15350 636 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 PCDH7O60245 1069 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 DNAJA2O60884 412 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 NCR1O76036 304 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 IGHV2-5P01817 119 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 CELA3BP08861 270 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 PPIAL4FP0DN26 164 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 ACP2P11117 423 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 PRPS2P11908 318 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 CHN1P15882 459 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 ARL1P40616 181 aaPredicted RBP6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 PPP1R7Q15435 360 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 DUSP5Q16690 384 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 NDUFAF6Q330K2 333 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 SYT14P1Q58G82 188 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 EXOSC6Q5RKV6 272 aaKnown RBP6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 CCNJQ5T5M9 372 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 AVPI1Q5T686 147 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 REP15Q6BDI9 236 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 LETMD1Q6P1Q0 360 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 LRIG3Q6UXM1 1119 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 RAPH1Q70E73 1250 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 ZIC4Q8N9L1 334 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 OR1K1Q8NGR3 316 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 OR5W2Q8NH69 310 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 MAGEE2Q8TD90 523 aaPredicted RBP6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 GRK7Q8WTQ7 553 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 JADE3Q92613 823 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 GTF3AQ92664 365 aaKnown RBP6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 ARL8AQ96BM9 186 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 RAB39BQ96DA2 213 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 MS4A14Q96JA4 679 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 HSH2DQ96JZ2 352 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 ARL5BQ96KC2 179 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 GPR78Q96P69 363 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 MRPL37Q9BZE1 423 aaKnown RBP6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 QRSL1Q9H0R6 528 aaKnown RBP6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 EQTNQ9NQ60 294 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 TMEM45AQ9NWC5 275 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 OXSMQ9NWU1 459 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 C1RLQ9NZP8 487 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 ZNF225Q9UK10 706 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 PCTPQ9UKL6 214 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 CMAHPQ9Y471 501 aa6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 SOX21Q9Y651 276 aaPredicted RBP6.25□□□□□ -1.41
SPTLC1-205ENST00000477888 IGHV2OR16-5A0A0B4J2B6 119 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 E7ESA3 106 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 DNPH1O43598 174 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 CLPXO76031 633 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 NDUFA7O95182 113 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 PMS2P2O95744 297 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 HSD3B1P14060 373 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 CBR1P16152 277 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 NR4A1P22736 598 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 CRABP2P29373 138 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 TIA1P31483 386 aaKnown RBP eCLIP6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 ALDH3B1P43353 468 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 MAGEA8P43361 318 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 FNTAP49354 379 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 RNF144AP50876 292 aaPredicted RBP6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 RAG2P55895 527 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 SESN3P58005 492 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 UBE2NP61088 152 aaKnown RBP6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 TUBA1BP68363 451 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 TUBA4AP68366 448 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 MVKQ03426 396 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 SLC17A1Q14916 467 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 RUSC1-AS1Q66K80 236 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 C11orf87Q6NUJ2 197 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 SYT10Q6XYQ8 523 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 C9orf139Q6ZV77 190 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 CYS1Q717R9 158 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 TUBA1AQ71U36 451 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 ZNF551Q7Z340 670 aaPredicted RBP6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 GAS2L3Q86XJ1 694 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 ADGRG3Q86Y34 549 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 WDFY1Q8IWB7 410 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 POMGNT2Q8NAT1 580 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 TMEM45BQ96B21 275 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 ZHX1-C8orf76Q96EF9 292 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 C16orf58Q96GQ5 468 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 APIPQ96GX9 242 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 ZNF317Q96PQ6 595 aaPredicted RBP6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 NELFAQ9H3P2 528 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 NOX3Q9HBY0 568 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 MOV10Q9HCE1 1003 aaKnown RBP6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 SERINC1Q9NRX5 453 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 TXNDC16Q9P2K2 825 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 SNX6Q9UNH7 406 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 SLC9A8Q9Y2E8 581 aa6.24□□□□□ -1.41
SPTLC1-205ENST00000477888 A0A096LPE4 126 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 A0A1W2PPZ6 126 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 C5orf63A6NC05 138 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 FAM159BA6NKW6 160 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 TRIM49D1C9J1S8 452 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 NPIPB9F8W1W9 429 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 H3BNH8 94 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms