RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 G3V2T6 193 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 LINC01387J3KSC0 135 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 E2F6O75461 281 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 HPRP00739 348 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 H1F0P07305 194 aaKnown RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 NPIPA8P0DM63 369 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 CPN1P15169 458 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 HK1P19367 917 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 FKBP2P26885 142 aaKnown RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 RRM2P31350 389 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 VHLP40337 213 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 PTDSS1P48651 473 aaKnown RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 HSPA13P48723 471 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 LHX2P50458 406 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 B3GALT5-AS1P59052 145 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 VLDLRP98155 873 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 EPS8Q12929 822 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 SF3B4Q15427 424 aaKnown RBP eCLIP8.84□□□□□ -0.99
NIFK-205ENST00000477693 TRIP10Q15642 601 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 CD226Q15762 336 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 RFX4Q33E94 735 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 ACSF3Q4G176 576 aaPredicted RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 C1orf185Q5T7R7 199 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 OGFRL1Q5TC84 451 aaPredicted RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 PPP4R4Q6NUP7 873 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 SHQ1Q6PI26 577 aaKnown RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 ZNF836Q6ZNA1 936 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 ZBTB49Q6ZSB9 765 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 RNF113BQ8IZP6 322 aaKnown RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 OFCC1Q8IZS5 231 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 LILRA2Q8N149 483 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 CLIP4Q8N3C7 705 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 GATSQ8NAP1 163 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 OR6T1Q8NGN1 323 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 RND1Q92730 232 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 ARSGQ96EG1 525 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 PSD2Q9BQI7 771 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 PIGQQ9BRB3 760 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 KLHL4Q9C0H6 718 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 QRSL1Q9H0R6 528 aaKnown RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 NMNAT1Q9HAN9 279 aaPredicted RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 C12orf10Q9HB07 376 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 KRCC1Q9NPI7 259 aaPredicted RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 SELENONQ9NZV5 590 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 SAMHD1Q9Y3Z3 626 aaKnown RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 KLF2Q9Y5W3 355 aaPredicted RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 V9GYQ6 96 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 ZNF407Q9C0G0 2248 aa8.84□□□□□ -0.99
NIFK-205ENST00000477693 NCOA6Q14686 2063 aaPredicted RBP8.84□□□□□ -0.99
NIFK-205ENST00000477693 UTP20O75691 2785 aaKnown RBP8.84□□□□□ -1
NIFK-205ENST00000477693 GTF3C1Q12789 2109 aa8.83□□□□□ -1
NIFK-205ENST00000477693 A0A087WZY1 265 aa8.83□□□□□ -1
NIFK-205ENST00000477693 A1L4Q6 167 aa8.83□□□□□ -1
NIFK-205ENST00000477693 C7orf72A4D263 438 aa8.83□□□□□ -1
NIFK-205ENST00000477693 TRAPPC13A5PLN9 417 aa8.83□□□□□ -1
NIFK-205ENST00000477693 FAM47E-STBD1D6RA91 191 aa8.83□□□□□ -1
NIFK-205ENST00000477693 hCG_2039718K7EN88 272 aa8.83□□□□□ -1
NIFK-205ENST00000477693 TNFRSF11BO00300 401 aa8.83□□□□□ -1
NIFK-205ENST00000477693 CYP7B1O75881 506 aa8.83□□□□□ -1
NIFK-205ENST00000477693 GADD45GO95257 159 aa8.83□□□□□ -1
NIFK-205ENST00000477693 EPPINO95925 133 aa8.83□□□□□ -1
NIFK-205ENST00000477693 IGF2P01344 180 aa8.83□□□□□ -1
NIFK-205ENST00000477693 LINGO3P0C6S8 592 aa8.83□□□□□ -1
NIFK-205ENST00000477693 GLI4P10075 376 aa8.83□□□□□ -1
NIFK-205ENST00000477693 PNMTP11086 282 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ANXA8P13928 327 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ZNF708P17019 499 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ZNF17P17021 662 aa8.83□□□□□ -1
NIFK-205ENST00000477693 PGCP20142 388 aa8.83□□□□□ -1
NIFK-205ENST00000477693 RBM34P42696 430 aaKnown RBP8.83□□□□□ -1
NIFK-205ENST00000477693 HTR3AP46098 478 aa8.83□□□□□ -1
NIFK-205ENST00000477693 OR1E2P47887 323 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ERFP50548 548 aa8.83□□□□□ -1
NIFK-205ENST00000477693 NUP107P57740 925 aa8.83□□□□□ -1
NIFK-205ENST00000477693 TAS2R41P59536 307 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ZNF117Q03924 483 aa8.83□□□□□ -1
NIFK-205ENST00000477693 PMPCAQ10713 525 aa8.83□□□□□ -1
NIFK-205ENST00000477693 CBFBQ13951 182 aa8.83□□□□□ -1
NIFK-205ENST00000477693 TRAM2Q15035 370 aa8.83□□□□□ -1
NIFK-205ENST00000477693 BCL2A1Q16548 175 aa8.83□□□□□ -1
NIFK-205ENST00000477693 TMEM44Q2T9K0 475 aa8.83□□□□□ -1
NIFK-205ENST00000477693 RIPPLY2Q5TAB7 128 aa8.83□□□□□ -1
NIFK-205ENST00000477693 RAET1LQ5VY80 246 aa8.83□□□□□ -1
NIFK-205ENST00000477693 NSUN5P2Q63ZY6 315 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ULK3Q6PHR2 472 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ARSKQ6UWY0 536 aa8.83□□□□□ -1
NIFK-205ENST00000477693 RRM2BQ7LG56 351 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ADGRE4PQ86SQ3 457 aa8.83□□□□□ -1
NIFK-205ENST00000477693 LACC1Q8IV20 430 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ZNF614Q8N883 585 aa8.83□□□□□ -1
NIFK-205ENST00000477693 OR5W2Q8NH69 310 aa8.83□□□□□ -1
NIFK-205ENST00000477693 B4GALNT2Q8NHY0 566 aa8.83□□□□□ -1
NIFK-205ENST00000477693 PHOSPHO1Q8TCT1 267 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ZPLD1Q8TCW7 415 aa8.83□□□□□ -1
NIFK-205ENST00000477693 TMEM234Q8WY98 164 aa8.83□□□□□ -1
NIFK-205ENST00000477693 SLC38A4Q969I6 547 aa8.83□□□□□ -1
NIFK-205ENST00000477693 SFXN2Q96NB2 322 aa8.83□□□□□ -1
NIFK-205ENST00000477693 UCN2Q96RP3 112 aa8.83□□□□□ -1
NIFK-205ENST00000477693 MCHR1Q99705 422 aa8.83□□□□□ -1
NIFK-205ENST00000477693 RBM4BQ9BQ04 359 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms