RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 NKAIN2Q5VXU1 208 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 PLAG1Q6DJT9 500 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 MRPL38Q96DV4 380 aaKnown RBP17.34■□□□□ 0.37
VARS2-209ENST00000477288 TXN2Q99757 166 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 G3V3Y1 287 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 HOXC13P31276 330 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 SLC7A9P82251 487 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 GPR18Q14330 331 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 C6orf89Q6UWU4 347 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 C1QTNF2Q9BXJ5 285 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 HCSTQ9UBK5 93 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 HHLA2Q9UM44 414 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 HIST1H1TP22492 207 aaPredicted RBP17.34■□□□□ 0.37
VARS2-209ENST00000477288 CCL11P51671 97 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 HNF4GQ14541 408 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 PROX2Q3B8N5 592 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 FAM69AQ5T7M9 428 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 NDUFAF7Q7L592 441 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 BRIX1Q8TDN6 353 aaKnown RBP17.34■□□□□ 0.37
VARS2-209ENST00000477288 CMSS1Q9BQ75 279 aaKnown RBP17.34■□□□□ 0.37
VARS2-209ENST00000477288 ELOVL3Q9HB03 270 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 SULT1C2O00338 296 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 SSR4P51571 173 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 RRADP55042 308 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 STEAP2Q8NFT2 490 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 GALR3O60755 368 aaPredicted RBP17.34■□□□□ 0.37
VARS2-209ENST00000477288 F13BP05160 661 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 CLEC3BP05452 202 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 NPBWR1P48145 328 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 ZNF140P52738 457 aaPredicted RBP17.34■□□□□ 0.37
VARS2-209ENST00000477288 CLDN17P56750 224 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 C19orf47Q8N9M1 422 aaKnown RBP17.34■□□□□ 0.37
VARS2-209ENST00000477288 INSM2Q96T92 566 aaPredicted RBP17.34■□□□□ 0.37
VARS2-209ENST00000477288 TMEM181Q9P2C4 612 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 EMC9Q9Y3B6 208 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 ASB4Q9Y574 426 aa17.34■□□□□ 0.37
VARS2-209ENST00000477288 H0YGG7 62 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 GPR137BO60478 399 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 SNNO75324 88 aaPredicted RBP17.33■□□□□ 0.37
VARS2-209ENST00000477288 TGM6O95932 706 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 MC2RQ01718 297 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 PEA15Q15121 130 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 FXNQ16595 210 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 ZFAND2BQ8WV99 257 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 EDAQ92838 391 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 UPRTQ96BW1 309 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 FOXRED1Q96CU9 486 aaPredicted RBP17.33■□□□□ 0.37
VARS2-209ENST00000477288 AMDHD1Q96NU7 426 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 KRBA1A5PL33 1030 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 SLC2A1P11166 492 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 DESI1Q6ICB0 168 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 S100A7AQ86SG5 101 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 OR52D1Q9H346 318 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 NOX3Q9HBY0 568 aa17.33■□□□□ 0.37
VARS2-209ENST00000477288 NOSIPQ9Y314 301 aaKnown RBP17.33■□□□□ 0.37
VARS2-209ENST00000477288 GPR39O43194 453 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 DMWDQ09019 674 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 MSMO1Q15800 293 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 SORCS2Q96PQ0 1159 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 KIF25Q9UIL4 384 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 ADAMTSL3P82987 1691 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 RFPL3O75679 317 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 TCN2P20062 427 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 PRDX3P30048 256 aaKnown RBP17.33■□□□□ 0.36
VARS2-209ENST00000477288 PRLHRP49683 370 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 TAS2R30P59541 319 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 RBMXL3Q8N7X1 1067 aaKnown RBP17.33■□□□□ 0.36
VARS2-209ENST00000477288 OR14A16Q8NHC5 309 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 HAVCR2Q8TDQ0 301 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 CALHM2Q9HA72 323 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 SLC6A20Q9NP91 592 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 GPR75O95800 540 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 TP53P04637 393 aaPredicted RBP17.33■□□□□ 0.36
VARS2-209ENST00000477288 C1SP09871 688 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 APEHP13798 732 aaKnown RBP17.33■□□□□ 0.36
VARS2-209ENST00000477288 OPRL1P41146 370 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 TRA2BP62995 288 aaKnown RBP17.33■□□□□ 0.36
VARS2-209ENST00000477288 ARL16Q0P5N6 197 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 TNK1Q13470 666 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 FAM160A2Q8N612 972 aaPredicted RBP17.33■□□□□ 0.36
VARS2-209ENST00000477288 ZNF480Q8WV37 535 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 METTL9Q9H1A3 318 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 RASD1Q9Y272 281 aa17.33■□□□□ 0.36
VARS2-209ENST00000477288 SUSD5O60279 629 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 FCGR2AP12318 317 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 LTBQ06643 244 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 SMIM14Q96QK8 99 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 ZNF286AQ9HBT8 521 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 DECR2Q9NUI1 292 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 DPM1O60762 260 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 GJB3O75712 270 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 UPK1BO75841 260 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 MGST1P10620 155 aaKnown RBP17.32■□□□□ 0.36
VARS2-209ENST00000477288 IKZF1Q13422 519 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 PIWIL3Q7Z3Z3 882 aaKnown RBP17.32■□□□□ 0.36
VARS2-209ENST00000477288 ABHD11Q8NFV4 315 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 H1FXQ92522 213 aaKnown RBP17.32■□□□□ 0.36
VARS2-209ENST00000477288 PDLIM7Q9NR12 457 aa17.32■□□□□ 0.36
VARS2-209ENST00000477288 IMPA2O14732 288 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms