RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 PAPLNO95428 1278 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 PDX1P52945 283 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 H2BFSP57053 126 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 GMFBP60983 142 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 SLC9A5Q14940 896 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 SLC36A1Q7Z2H8 476 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 LRRTM4Q86VH4 590 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 SYS1Q8N2H4 156 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 HDDC3Q8N4P3 179 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 OR14A2Q96R54 314 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 AICDAQ9GZX7 198 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 IL36AQ9UHA7 158 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 OR5K4A6NMS3 321 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 IFITM5A6NNB3 132 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 RIIAD1A6NNX1 92 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 ZNF879B4DU55 563 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 LCMT2O60294 686 aaKnown RBP16.37■□□□□ 0.21
CCM2-207ENST00000475551 CLUP10909 449 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 MPGP29372 298 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 HSD17B2P37059 387 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 P2RX1P51575 399 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 PPP2CBP62714 309 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 PPP2CAP67775 309 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 FGL1Q08830 312 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 PUS10Q3MIT2 529 aaKnown RBP16.37■□□□□ 0.21
CCM2-207ENST00000475551 TP53I3Q53FA7 332 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 CNKSR3Q6P9H4 555 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 THSD4Q6ZMP0 1018 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 GAREM2Q75VX8 874 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 ADIPOR2Q86V24 386 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 PAQR7Q86WK9 346 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 TCEAL8Q8IYN2 117 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 OR52B4Q8NGK2 314 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 OR5M1Q8NGP8 315 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 MYLIPQ8WY64 445 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 PELI1Q96FA3 418 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 S100A16Q96FQ6 103 aaKnown RBP16.37■□□□□ 0.21
CCM2-207ENST00000475551 IGSF21Q96ID5 467 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 NRTNQ99748 197 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 GINS4Q9BRT9 223 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 GPR34Q9UPC5 381 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 FOXJ3Q9UPW0 622 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 SLC6A5Q9Y345 797 aa16.37■□□□□ 0.21
CCM2-207ENST00000475551 LRIT2A6NDA9 550 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 F5H5P2 479 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 ACOT7O00154 380 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 PRAMEF2O60811 474 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 VSIG10L2P0DP72 767 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 RPA2P15927 270 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 SRMP19623 302 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 CSNK2A2P19784 350 aaPredicted RBP16.36■□□□□ 0.21
CCM2-207ENST00000475551 PSMB5P28074 263 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 DCTDP32321 178 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 MNDAP41218 407 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 ZNF136P52737 540 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 SIRPAP78324 504 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 S100A12P80511 92 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 ILF3Q12906 894 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCM2-207ENST00000475551 RAB33AQ14088 237 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 CSRP2Q16527 193 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 HES5Q5TA89 166 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 FAAP20Q6NZ36 180 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCM2-207ENST00000475551 FRRS1Q6ZNA5 592 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 FCRLAQ7L513 359 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 PFN4Q8NHR9 129 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 GFI1Q99684 422 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 USB1Q9BQ65 265 aaKnown RBP16.36■□□□□ 0.21
CCM2-207ENST00000475551 ACTRT3Q9BYD9 372 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 NKX6-2Q9C056 277 aaPredicted RBP16.36■□□□□ 0.21
CCM2-207ENST00000475551 C20orf141Q9NUB4 165 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 PLCL2Q9UPR0 1127 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 KIAA1549LQ6ZVL6 1849 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 A0A1W2PR48 441 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 TRAPPC13A5PLN9 417 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 K7ESM1 405 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 CDC123O75794 336 aaPredicted RBP16.36■□□□□ 0.21
CCM2-207ENST00000475551 SIX6O95475 246 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 RAB40ALP0C0E4 278 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 MC3RP41968 323 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 ACTA2P62736 377 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 ACTG2P63267 376 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 DEFA5Q01523 94 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 POM121L1PQ3SYA9 428 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 RPL22L1Q6P5R6 122 aaKnown RBP16.36■□□□□ 0.21
CCM2-207ENST00000475551 TMEM25Q86YD3 366 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 C15orf40Q8WUR7 153 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 TMEM239Q8WW34 195 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 RAB40AQ8WXH6 277 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 TFGQ92734 400 aaPredicted RBP16.36■□□□□ 0.21
CCM2-207ENST00000475551 SLC35A4Q96G79 324 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 UQCC2Q9BRT2 126 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 MTHFD2LQ9H903 347 aaPredicted RBP16.36■□□□□ 0.21
CCM2-207ENST00000475551 CLDND1Q9NY35 253 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 CPNE7Q9UBL6 633 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 NDRG3Q9UGV2 375 aa16.36■□□□□ 0.21
CCM2-207ENST00000475551 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.35■□□□□ 0.21
CCM2-207ENST00000475551 PYCARD-AS1I3L0S3 204 aa16.35■□□□□ 0.21
CCM2-207ENST00000475551 C8orf89P0DMQ9 161 aa16.35■□□□□ 0.21
CCM2-207ENST00000475551 ZNF35P13682 527 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms