RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 TCN1P20061 433 aaPredicted RBP6.81□□□□□ -1.32
USP54-211ENST00000474929 NR4A1P22736 598 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 CPT2P23786 658 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 GABRB3P28472 473 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 GLRXP35754 106 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 ALDH3B1P43353 468 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 PRIM2P49643 509 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 P2RX1P51575 399 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 SLC12A2P55011 1212 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 EMX1Q04741 257 aaPredicted RBP6.81□□□□□ -1.32
USP54-211ENST00000474929 SPA17Q15506 151 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 NKPD1Q17RQ9 610 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 GLIPR1L2Q4G1C9 344 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 SLC25A53Q5H9E4 307 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 PGBD2Q6P3X8 592 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 APOOLQ6UXV4 268 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 TMPPEQ6ZT21 453 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 PEX26Q7Z412 305 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 PRUNE1Q86TP1 453 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 CMIPQ8IY22 773 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 CCDC36Q8IYA8 594 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 RNF175Q8N4F7 328 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 DTX3Q8N9I9 347 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 ATP6V1C2Q8NEY4 427 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 OR1K1Q8NGR3 316 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 OR6Y1Q8NGX8 325 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 DPF1Q92782 380 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 ZG16BQ96DA0 208 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 ELMOD3Q96FG2 381 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 LMF2Q9BU23 707 aaKnown RBP6.81□□□□□ -1.32
USP54-211ENST00000474929 LAT2Q9GZY6 243 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 UBAP1Q9NZ09 502 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 NUDT4Q9NZJ9 180 aa6.81□□□□□ -1.32
USP54-211ENST00000474929 ZMAT5Q9UDW3 170 aaKnown RBP6.81□□□□□ -1.32
USP54-211ENST00000474929 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.81□□□□□ -1.32
USP54-211ENST00000474929 RPUSD1Q9UJJ7 312 aaKnown RBP6.81□□□□□ -1.32
USP54-211ENST00000474929 MDFIC2A0A1B0GVS7 189 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 TCRBV7S2A1N4TA0A589 114 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 BTBD17A6NE02 478 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 ETV2O00321 342 aaPredicted RBP6.8□□□□□ -1.32
USP54-211ENST00000474929 TSPAN9O75954 239 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 JTBO76095 146 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 IPO7O95373 1038 aaKnown RBP6.8□□□□□ -1.32
USP54-211ENST00000474929 PMS2P2O95744 297 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 MELTFP08582 738 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 OR12D1P0DN82 309 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 CBR1P16152 277 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 LSP1P33241 339 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 NTF4P34130 210 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 FOXG1P55316 489 aaPredicted RBP6.8□□□□□ -1.32
USP54-211ENST00000474929 EGR3Q06889 387 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 DBPQ10586 325 aaPredicted RBP6.8□□□□□ -1.32
USP54-211ENST00000474929 LCP2Q13094 533 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 SNX1Q13596 522 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 ESCO2Q56NI9 601 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 SYT14P1Q58G82 188 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 SPANXN3Q5MJ09 141 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 TSPO2Q5TGU0 170 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 KRT80Q6KB66 452 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 FRRS1Q6ZNA5 592 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 COMMD6Q7Z4G1 85 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 METTL4Q8N3J2 472 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 KLHL36Q8N4N3 616 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 GATSQ8NAP1 163 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 MGARPQ8TDB4 240 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 ESAMQ96AP7 390 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 TMEM45BQ96B21 275 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 THOC1Q96FV9 657 aaKnown RBP6.8□□□□□ -1.32
USP54-211ENST00000474929 CERS2Q96G23 380 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 DPAGT1Q9H3H5 408 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 PIF1Q9H611 641 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 SAP30LQ9HAJ7 183 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 CRLF2Q9HC73 371 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 DECR2Q9NUI1 292 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 NMRK1Q9NWW6 199 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 ACOT9Q9Y305 439 aa6.8□□□□□ -1.32
USP54-211ENST00000474929 A0A096LPK6 155 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 C17orf100A8MU93 164 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 TRIM49D1C9J1S8 452 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 H0YL77 283 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 TPD52L2O43399 206 aaKnown RBP6.79□□□□□ -1.32
USP54-211ENST00000474929 EFNA2O43921 213 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 CDC14BO60729 498 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 EIF1BO60739 113 aaKnown RBP6.79□□□□□ -1.32
USP54-211ENST00000474929 PSMG1O95456 288 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 CD33P20138 364 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 LMO1P25800 156 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 GALK2Q01415 458 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 PAX8Q06710 450 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 GALNT1Q10472 559 aaPredicted RBP6.79□□□□□ -1.32
USP54-211ENST00000474929 HEPACAMQ14CZ8 416 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 CPSF6Q16630 551 aaKnown RBP eCLIP6.79□□□□□ -1.32
USP54-211ENST00000474929 MOGQ16653 247 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 TRMT5Q32P41 509 aaKnown RBP6.79□□□□□ -1.32
USP54-211ENST00000474929 TTMPQ5BVD1 217 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 FBXO48Q5FWF7 155 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 GKAP1Q5VSY0 366 aaPredicted RBP6.79□□□□□ -1.32
USP54-211ENST00000474929 Q6ZSV7 163 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 C1orf174Q8IYL3 243 aa6.79□□□□□ -1.32
USP54-211ENST00000474929 CCDC170Q8IYT3 715 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms