RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 ZNF724A8MTY0 619 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PDZK1P1A8MUH7 402 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ANKRD63C9JTQ0 380 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CYB561D2O14569 222 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 DXOO77932 396 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 EGFP01133 1207 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 RHOCP08134 193 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 AKR1C3P42330 323 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 TNFSF10P50591 281 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 GEMP55040 296 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 KLF3P57682 345 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SNRNP35Q16560 246 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 EXOC3L2Q2M3D2 409 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 GLYR1Q49A26 553 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PYCR3Q53H96 274 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SLC27A1Q6PCB7 646 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CTU1Q7Z7A3 348 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PEG10Q86TG7 708 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 LRRC28Q86X40 367 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SERPINA12Q8IW75 414 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PARP16Q8N5Y8 322 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF655Q8N720 491 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 RHBDD1Q8TEB9 315 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PPWD1Q96BP3 646 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ZC3HAV1LQ96H79 300 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 FCRL1Q96LA6 429 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 MRGPRX2Q96LB1 330 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 HARBI1Q96MB7 349 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PIGQQ9BRB3 760 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 MBNL1Q9NR56 388 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 GPR173Q9NS66 373 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 IL17BQ9UHF5 180 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ZFP30Q9Y2G7 519 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 KCNIP3Q9Y2W7 256 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 FBXO7Q9Y3I1 522 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PLEKHM1Q9Y4G2 1056 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 A0A0G2JN53 185 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SIAH2O43255 324 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 VPS26AO75436 327 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 STBD1O95210 358 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SERPIND1P05546 499 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 EDNRBP24530 442 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 AOAHP28039 575 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CD6P30203 668 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 GJA5P36382 358 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PGM1P36871 562 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SLC18A1P54219 525 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CRMP1Q14194 572 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 GUK1Q16774 197 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 TRIM60Q495X7 471 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ELFN2Q5R3F8 820 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 AVPI1Q5T686 147 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 KCTD8Q6ZWB6 473 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 MOB2Q70IA6 237 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 STRADAQ7RTN6 431 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 FAM71CQ8NEG0 241 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SPPL2BQ8TCT7 592 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 NARS2Q96I59 477 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 NOL4LQ96MY1 436 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 QKIQ96PU8 341 aaKnown RBP eCLIP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 RBM15Q96T37 977 aaKnown RBP eCLIP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ACOX2Q99424 681 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CHRAC1Q9NRG0 131 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 C1orf109Q9NX04 203 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 MTCH2Q9Y6C9 303 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 A0A0A6YYH2 397 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 TRAV19A0A0A6YYK7 116 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ANTXRLA6NF34 631 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 A6NJ64 397 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 TMEM200CA6NKL6 621 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ARHGEF33A8MVX0 844 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SCGB2A1O75556 95 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CALCBP10092 127 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 MPZP25189 248 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 GDF1P27539 372 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CST5P28325 142 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CFHR2P36980 270 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 GPR12P47775 334 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 IDH3AP50213 366 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 BLKP51451 505 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 EPHA4P54764 986 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 NRG3P56975 720 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 RGS8P57771 180 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 FMO1Q01740 532 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 MAPK11Q15759 364 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 TMEM177Q53S58 311 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CD300LDQ6UXZ3 194 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ASB18Q6ZVZ8 466 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 FBXO16Q8IX29 292 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 OR10W1Q8NGF6 305 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 LINC01599Q8WXQ3 324 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 EXTL1Q92935 676 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ASB9Q96DX5 294 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 TCTN2Q96GX1 697 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 DEFB118Q96PH6 123 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 FMO2Q99518 471 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 C1QTNF1Q9BXJ1 281 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 GSX2Q9BZM3 304 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 RTN4RQ9BZR6 473 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PPIL3Q9H2H8 161 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms