RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 LYPLAL1Q5VWZ2 237 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 RNF219Q5W0B1 726 aaPredicted RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 FRG2Q64ET8 278 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 NUP54Q7Z3B4 507 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 MON1AQ86VX9 555 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 HIST3H2BBQ8N257 126 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SVBPQ8N300 66 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 NEIL3Q8TAT5 605 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 UBASH3BQ8TF42 649 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 NUDCD2Q8WVJ2 157 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 PMM1Q92871 262 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 MIB2Q96AX9 1013 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 PPP1R16AQ96I34 528 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 MRGPRX3Q96LB0 322 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ASB16Q96NS5 453 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 GNRHR2Q96P88 292 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 FRG2BQ96QU4 278 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 GAL3ST1Q99999 423 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ORAI3Q9BRQ5 295 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 HCAR1Q9BXC0 346 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 QRSL1Q9H0R6 528 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 Q9N2J8 555 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ZDHHC4Q9NPG8 344 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SEMA4GQ9NTN9 838 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ZNF624Q9P2J8 865 aaPredicted RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 GDF2Q9UK05 429 aaPredicted RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 RUVBL1Q9Y265 456 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 RNF115Q9Y4L5 304 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ETV7Q9Y603 341 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 IRAK3Q9Y616 596 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 DMDP11532 3685 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SNRNP200O75643 2136 aaKnown RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 MARCH11A6NNE9 402 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 WASH3PC4AMC7 463 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 H0YIZ8 118 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 WRBO00258 174 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 KIAA0355O15063 1070 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ZNF264O43296 627 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 PIP5K1CO60331 668 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ULK1O75385 1050 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 UPK3AO75631 287 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 GBAP04062 536 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 GALTP07902 379 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 RAB4AP20338 218 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 BSGP35613 385 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ASMTP46597 345 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ACLYP53396 1101 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 PLA2G7Q13093 441 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 CRMP1Q14194 572 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 PLEKHS1Q5SXH7 462 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 FBXL22Q6P050 247 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 WDR88Q6ZMY6 472 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 LAPTM4BQ86VI4 370 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 RBM45Q8IUH3 476 aaKnown RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 VRK3Q8IV63 474 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 FBXO16Q8IX29 292 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 LRRC18Q8N456 261 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 MEIOBQ8N635 442 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 RELL2Q8NC24 303 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 DNAAF1Q8NEP3 725 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 GPRC5AQ8NFJ5 357 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OR8G5Q8NG78 346 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OR6C4Q8NGE1 309 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OR10G4Q8NGN3 311 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OR1S2Q8NGQ3 325 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 RPLP0P6Q8NHW5 317 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 PCNPQ8WW12 178 aaKnown RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 SPRYD4Q8WW59 207 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 GATAD2BQ8WXI9 593 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 MUCL1Q96DR8 90 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 RRNAD1Q96FB5 475 aaKnown RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 TMEM169Q96HH4 297 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 LRR1Q96L50 414 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 SMIM14Q96QK8 99 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 THUMPD3Q9BV44 507 aaKnown RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 SLC5A7Q9GZV3 580 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 MAGEH1Q9H213 219 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ABCG8Q9H221 673 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OR51B6Q9H340 312 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 REEP4Q9H6H4 257 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 SPACA1Q9HBV2 294 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 BPIFA1Q9NP55 256 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 IL26Q9NPH9 171 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 C2orf42Q9NWW7 574 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OR5V1Q9UGF6 321 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 CCNL1Q9UK58 526 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 SH2B3Q9UQQ2 575 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 RASD1Q9Y272 281 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 SLC35A3Q9Y2D2 325 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 HEATR5BQ9P2D3 2071 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OR6C74A6NCV1 312 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 PYCARD-AS1I3L0S3 204 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 SSX5O60225 188 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 B4GALT3O60512 393 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ANXA7P20073 488 aaKnown RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 MSX1P28360 303 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 AVPR2P30518 371 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ACVRL1P37023 503 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 CASRP41180 1078 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 STAT5AP42229 794 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms