RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 RIPPLY1Q0D2K3 151 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 EXOC3L2Q2M3D2 409 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SCGB2B2Q4G0G5 96 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ACSM3Q53FZ2 586 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 TIMM23BQ5SRD1 257 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 OR2G6Q5TZ20 316 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SAMD13Q5VXD3 122 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 METRNLQ641Q3 311 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 FAM45BPQ6NSW5 357 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 TAPT1Q6NXT6 567 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ABHD15Q6UXT9 468 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 DLK2Q6UY11 383 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ADAMTSL4Q6UY14 1074 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ZNF782Q6ZMW2 699 aaPredicted RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 TMED4Q7Z7H5 227 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 YAF2Q8IY57 180 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 LGI4Q8N135 537 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 GABRG1Q8N1C3 465 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SMIM20Q8N5G0 67 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 TTC16Q8NEE8 873 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 NUP43Q8NFH3 380 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 OR5L1Q8NGL2 311 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 OR4Q3Q8NH05 313 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 FCRL5Q96RD9 977 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 LPAR4Q99677 370 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 WRAP53Q9BUR4 548 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 C20orf24Q9BUV8 137 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SPATA5L1Q9BVQ7 753 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 NIPAL2Q9H841 368 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 GKN1Q9NS71 199 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 MED9Q9NWA0 146 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 HSPB7Q9UBY9 170 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 FBXL2Q9UKC9 423 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ING4Q9UNL4 249 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 RBM7Q9Y580 266 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 CCDC18Q5T9S5 1454 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 A0A0G2JN53 185 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 OR6C68A6NDL8 312 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 FAM90A27PA6NNH2 459 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 PDXKO00764 312 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 MBTPS2O43462 519 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 DUSP11O75319 330 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 UTS2O95399 124 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CRYBA1P05813 215 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 FURINP09958 794 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 LIPCP11150 499 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SPNP16150 400 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 GCLMP48507 274 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 PPT1P50897 306 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 FOXL2P58012 376 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 OR4D2P58180 307 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 STXBP1P61764 594 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 ACVR1Q04771 509 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CNTN1Q12860 1018 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SLC13A2Q13183 592 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CTBP1Q13363 440 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CTTNQ14247 550 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 SURF2Q15527 256 aaPredicted RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 QRICH1Q2TAL8 776 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 TMEM42Q69YG0 159 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 TEX38Q6PEX7 206 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 DNM1P34Q6PK57 102 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CBLN3Q6UW01 205 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 SSX7Q7RTT5 188 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 CTU1Q7Z7A3 348 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 XYLT1Q86Y38 959 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 Q8NA96 180 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 KREMEN2Q8NCW0 462 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 RNASEH2CQ8TDP1 164 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 PHF10Q8WUB8 498 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 YIPF6Q96EC8 236 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 KLHDC7BQ96G42 594 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 ITCHQ96J02 903 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 LMLNQ96KR4 655 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 NOL4LQ96MY1 436 aaPredicted RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 MTERF1Q99551 399 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 URM1Q9BTM9 101 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 DPH1Q9BZG8 443 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 KATNBL1Q9H079 304 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 MMP28Q9H239 520 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 GSTO2Q9H4Y5 243 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 POLE4Q9NR33 117 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 DDIT4Q9NX09 232 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 GAR1Q9NY12 217 aaKnown RBP3.2□□□□□ -1.9
UBR3-208ENST00000474426 FOXJ3Q9UPW0 622 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 LRRIQ1Q96JM4 1722 aa3.2□□□□□ -1.9
UBR3-208ENST00000474426 TMEM89A2RUT3 159 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 F5H5T6 163 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ARPC1BO15143 372 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 DEAF1O75398 565 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 CLDN7O95471 211 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CA3P07451 260 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CSF3P09919 207 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PET100P0DJ07 73 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ADORA3P0DMS8 318 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PSMB4P28070 264 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 GZMKP49863 264 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CLCN3P51790 818 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 AQP4P55087 323 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 HSF1Q00613 529 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms