RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 MAP2K6P52564 334 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 DLX5P56178 289 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 FOXK1P85037 733 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 IL1RL1Q01638 556 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 LY6DQ14210 128 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 SLC10A1Q14973 349 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 SEC23BQ15437 767 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 SNCBQ16143 134 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 LRRC36Q1X8D7 754 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 MICAQ29983 383 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 SYT14P1Q58G82 188 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 C1orf140Q5VVS0 124 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 LPCAT4Q643R3 524 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 TBPL2Q6SJ96 375 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 C5orf46Q6UWT4 87 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 MBOAT2Q6ZWT7 520 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 TMEM179BQ7Z7N9 219 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 ADGRG3Q86Y34 549 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 P3H2Q8IVL5 708 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 CDK20Q8IZL9 346 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 RNF113BQ8IZP6 322 aaKnown RBP7.53□□□□□ -1.2
CNN3-205ENST00000474409 C10orf53Q8N6V4 93 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 EXD3Q8N9H8 876 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 ATG16L2Q8NAA4 619 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 AQP11Q8NBQ7 271 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 STK35Q8TDR2 534 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 RELTQ969Z4 430 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 DNAJA3Q96EY1 480 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 FAM46AQ96IP4 442 aaKnown RBP7.53□□□□□ -1.2
CNN3-205ENST00000474409 TAAR6Q96RI8 345 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 UBL7Q96S82 380 aaPredicted RBP7.53□□□□□ -1.2
CNN3-205ENST00000474409 RBM4BQ9BQ04 359 aaKnown RBP7.53□□□□□ -1.2
CNN3-205ENST00000474409 ZNF426Q9BUY5 554 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 RBM4Q9BWF3 364 aaKnown RBP7.53□□□□□ -1.2
CNN3-205ENST00000474409 TAPBPLQ9BX59 468 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 SLC19A3Q9BZV2 496 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 KLHL4Q9C0H6 718 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 OR11A1Q9GZK7 315 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 GABARAPL1Q9H0R8 117 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 DEFB127Q9H1M4 99 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 ZDHHC11Q9H8X9 412 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 ZNF556Q9HAH1 456 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 NPIPA1Q9UND3 350 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 TMEM5Q9Y2B1 443 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 SLC6A5Q9Y345 797 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 MRPS18CQ9Y3D5 142 aaKnown RBP7.53□□□□□ -1.2
CNN3-205ENST00000474409 ORC6Q9Y5N6 252 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 SPENQ96T58 3664 aaKnown RBP7.53□□□□□ -1.2
CNN3-205ENST00000474409 PIEZO2Q9H5I5 2752 aa7.53□□□□□ -1.2
CNN3-205ENST00000474409 IGKV1D-42A0A075B6H8 117 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 TRAV36DV7A0A075B6V5 113 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 ZC3H12DA2A288 527 aaKnown RBP7.52□□□□□ -1.21
CNN3-205ENST00000474409 EI24O14681 340 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 CASQ2O14958 399 aaPredicted RBP7.52□□□□□ -1.21
CNN3-205ENST00000474409 WISP1O95388 367 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 ADAP00813 363 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 OPN1LWP04000 364 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 CHMP24386 653 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 IGFBP5P24593 272 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 IDUAP35475 653 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 RPS5P46782 204 aaKnown RBP7.52□□□□□ -1.21
CNN3-205ENST00000474409 HMGA2P52926 109 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 NUP107P57740 925 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 B3GALT5-AS1P59052 145 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 RAC1P63000 192 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 DAG1Q14118 895 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 TMEM44Q2T9K0 475 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 CMPK2Q5EBM0 449 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 RNFT1Q5M7Z0 435 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 FAM69AQ5T7M9 428 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 OGFRL1Q5TC84 451 aaPredicted RBP7.52□□□□□ -1.21
CNN3-205ENST00000474409 PGBD2Q6P3X8 592 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 LINC00114Q6XXX2 140 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 ZBTB49Q6ZSB9 765 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 TRILQ7L0X0 811 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 MEX3DQ86XN8 651 aaKnown RBP7.52□□□□□ -1.21
CNN3-205ENST00000474409 UBQLNLQ8IYU4 475 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 CBR4Q8N4T8 237 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 MEIOBQ8N635 442 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 NEIL3Q8TAT5 605 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 GNPDA2Q8TDQ7 276 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 DNAJC9Q8WXX5 260 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 GTPBP3Q969Y2 492 aaKnown RBP7.52□□□□□ -1.21
CNN3-205ENST00000474409 BPIFA2Q96DR5 249 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 KTI12Q96EK9 354 aaPredicted RBP7.52□□□□□ -1.21
CNN3-205ENST00000474409 SGTBQ96EQ0 304 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 KLHL15Q96M94 604 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 OR5B2Q96R09 309 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 BARD1Q99728 777 aaKnown RBP7.52□□□□□ -1.21
CNN3-205ENST00000474409 PSD2Q9BQI7 771 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 FUZQ9BT04 418 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 ACKR4Q9NPB9 350 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 C8orf4Q9NR00 106 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 KRT84Q9NSB2 600 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 C20orf141Q9NUB4 165 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 MGAT4BQ9UQ53 548 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 ZNF337Q9Y3M9 751 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 MAGED1Q9Y5V3 778 aaPredicted RBP7.52□□□□□ -1.21
CNN3-205ENST00000474409 AP4B1Q9Y6B7 739 aa7.52□□□□□ -1.21
CNN3-205ENST00000474409 TLN1Q9Y490 2541 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms