RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CCDC116Q8IYX3 515 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 OR2A12Q8NGT7 310 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 C1orf216Q8TAB5 229 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 PELI1Q96FA3 418 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 LMLNQ96KR4 655 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 HS6ST2Q96MM7 605 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 CD180Q99467 661 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 PDCD1LG2Q9BQ51 273 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 AIF1LQ9BQI0 150 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 SLC25A18Q9H1K4 315 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 C20orf141Q9NUB4 165 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 FOXJ3Q9UPW0 622 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 TCF20Q9UGU0 1960 aaKnown RBP17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 TMEM272A0A1B0GTI8 110 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 LILRB5O75023 590 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 SLC2A5P22732 501 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 PRKAR1BP31321 381 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 ADH7P40394 386 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 CBFBQ13951 182 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 MOB3CQ70IA8 216 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 MUC20Q8N307 709 aaPredicted RBP17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 TET1Q8NFU7 2136 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 PFN4Q8NHR9 129 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 CCDC86Q9H6F5 360 aaKnown RBP17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 POT1Q9NUX5 634 aa17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 LSM7Q9UK45 103 aaKnown RBP17.18■□□□□ 0.34
ECHDC1-214ENST00000474289 A0A1W2PS29 197 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 KPNA3O00505 521 aaPredicted RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 MAN2B1O00754 1011 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 SULT1B1O43704 296 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 EIF4E2O60573 245 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 ABLIM3O94929 683 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 CKMP06732 381 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 SRMP19623 302 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 CD96P40200 585 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 TSSK4Q6SA08 328 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 NPAS4Q8IUM7 802 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 PUSL1Q8N0Z8 303 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 SYNPRQ8TBG9 265 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 SFXN5Q8TD22 340 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 STK35Q8TDR2 534 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 NOX4Q9NPH5 578 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 KRCC1Q9NPI7 259 aaPredicted RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 SLC25A13Q9UJS0 675 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 PLEKHM1Q9Y4G2 1056 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 KIAA1549LQ6ZVL6 1849 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 DISC1C4P0D8 188 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 ACOT7O00154 380 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 UBBP0CG47 229 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 UBCP0CG48 685 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 CNR1P21554 472 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 CDK2P24941 298 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 RPS27AP62979 156 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 UBA52P62987 128 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 ACTC1P68032 377 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 ACTA1P68133 377 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 CRMP1Q14194 572 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 POM121L1PQ3SYA9 428 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 HAGHLQ6PII5 290 aaPredicted RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 WDR88Q6ZMY6 472 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 LDLRAD3Q86YD5 345 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 ZNF433Q8N7K0 673 aaPredicted RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 OR5AR1Q8NGP9 310 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 S100A16Q96FQ6 103 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 TSNAXQ99598 290 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 TRMT61BQ9BVS5 477 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 OR2AG1Q9H205 316 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 BIN3Q9NQY0 253 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 ASF1AQ9Y294 204 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 IRAK3Q9Y616 596 aa17.17■□□□□ 0.34
ECHDC1-214ENST00000474289 A0A0A6YYD5 115 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 ANKRD61A6NGH8 418 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 H7BY64 318 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 PIN1P1O15428 100 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 LEFTY1O75610 366 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 RLN1P04808 185 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 C8orf89P0DMQ9 161 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 TIMP2P16035 220 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 MGMTP16455 207 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 CAPZA2P47755 286 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 RBMS2Q15434 407 aaKnown RBP17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 ZNF793Q6ZN11 406 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 OR4D10Q8NGI6 311 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 CNRIP1Q96F85 164 aaPredicted RBP17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 C10orf90Q96M02 699 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 PRAP1Q96NZ9 151 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 PRSS27Q9BQR3 290 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 ZDHHC5Q9C0B5 715 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 MOKQ9UQ07 419 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 MANSC4A6NHS7 340 aaPredicted RBP17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 PSMB5P28074 263 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 ACADLP28330 430 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 SSR2P43308 183 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 PDX1P52945 283 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 CLDN2P57739 230 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 SIRPAP78324 504 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 MRPS10P82664 201 aaKnown RBP17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 CAP1Q01518 475 aa17.16■□□□□ 0.34
ECHDC1-214ENST00000474289 OR4C11Q6IEV9 310 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms