RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 XPNPEP3Q9NQH7 507 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 DKKL1Q9UK85 242 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 MRTO4Q9UKD2 239 aaKnown RBP5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 FZD4Q9ULV1 537 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 CTNND2Q9UQB3 1225 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 PDE10AQ9Y233 779 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 B3GNT3Q9Y2A9 372 aa5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 SETD2Q9BYW2 2564 aaPredicted RBP5.59□□□□□ -1.52
SMARCE1-208ENST00000474246 NPIPA5A0A0B4J1W7 369 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 TRDCB7Z8K6 153 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 NPIPA5E9PKD4 350 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 NPIPA3F8WFD2 350 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 PDXKO00764 312 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 HYAL3O43820 417 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 ETHE1O95571 254 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 HOXD4P09016 255 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 HOXC4P09017 264 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 RAB40ALP0C0E4 278 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 AZGP1P25311 298 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 SDHAP31040 664 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 GDNFP39905 211 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 OR4D2P58180 307 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 IL13RA1P78552 427 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 ADORA2A-AS1P86434 159 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 INSM1Q01101 510 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 DNASE1L3Q13609 305 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 APOFQ13790 326 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 GRB14Q14449 540 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 NPY5RQ15761 445 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 RNASE10Q5GAN6 216 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 LRRC73Q5JTD7 316 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC22A10Q63ZE4 541 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 LPCAT4Q643R3 524 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 UGT3A1Q6NUS8 523 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF836Q6ZNA1 936 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 FCRLAQ7L513 359 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 ISCA2Q86U28 154 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 XYLT1Q86Y38 959 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 TMPRSS6Q8IU80 811 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 MFSD6LQ8IWD5 586 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 CTAGE3PQ8IX95 158 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 BHLHE22Q8NFJ8 381 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 B3GNT7Q8NFL0 401 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 PPP1R13LQ8WUF5 828 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 CNOT9Q92600 299 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 ALG3Q92685 438 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 COQ8BQ96D53 544 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 TCTN2Q96GX1 697 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 NOL4LQ96MY1 436 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 SORCS2Q96PQ0 1159 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 HBEGFQ99075 208 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 GTPBP2Q9BX10 602 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 MS4A7Q9GZW8 240 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 FN3KQ9H479 309 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC2A9Q9NRM0 540 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 SPATA6Q9NWH7 488 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 ABI3Q9P2A4 366 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC17A6Q9P2U8 582 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 GNPTGQ9UJJ9 305 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 POU2F3Q9UKI9 436 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 KLK13Q9UKR3 277 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 ZDHHC8Q9ULC8 765 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 RAB26Q9ULW5 256 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 NPIPA1Q9UND3 350 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 B9D1Q9UPM9 204 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC7A11Q9UPY5 501 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 YIPF1Q9Y548 306 aa5.58□□□□□ -1.52
SMARCE1-208ENST00000474246 PPIAL4EA0A075B759 164 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM89A2RUT3 159 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 E9PQ18 207 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 CXCR6O00574 342 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 KPNA4O00629 521 aaPredicted RBP5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 SDHDO14521 159 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 NBR2O15453 112 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 MAGEB4O15481 346 aaPredicted RBP5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF749O43361 778 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 NUAK1O60285 661 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 LRIG2O94898 1065 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 CCNE2O96020 404 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 FUCA1P04066 466 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 PPIAL4FP0DN26 164 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 SNHG28P0DPA3 235 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 SRFP11831 508 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 CD82P27701 267 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 SSTR5P35346 364 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC6A9P48067 706 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 PPOXP50336 477 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 CCL23P55773 120 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 UCP3P55916 312 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 HSD11B2P80365 405 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 P2RY14Q15391 338 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 CALCRLQ16602 461 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 POU2AF1Q16633 256 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 KCTD19Q17RG1 926 aaPredicted RBP5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 RNF151Q2KHN1 245 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 WDR72Q3MJ13 1102 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 DNLZQ5SXM8 178 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 OR2A2Q6IF42 318 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 MED27Q6P2C8 311 aa5.57□□□□□ -1.52
SMARCE1-208ENST00000474246 DNM1P34Q6PK57 102 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms