RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ZNF443Q9Y2A4 671 aaPredicted RBP9.93□□□□□ -0.82
CKS1B-206ENST00000474215 HEATR5AQ86XA9 2040 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 IGKV3D-15A0A087WSY6 115 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 TRBV5-3A0A0A0MS03 114 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 TMEM72A0PK05 275 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF716A6NP11 495 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 GPR171O14626 319 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 EIF1BO60739 113 aaKnown RBP9.92□□□□□ -0.82
CKS1B-206ENST00000474215 PRG2P13727 222 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 GPX2P18283 190 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 CD53P19397 219 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 LOXP28300 417 aaPredicted RBP9.92□□□□□ -0.82
CKS1B-206ENST00000474215 COPZ1P61923 177 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 SLC35A1P78382 337 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 H3F3AP84243 136 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 ITGADQ13349 1161 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 DEFB113Q30KQ7 82 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 METTL21CQ5VZV1 264 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 ABLIM2Q6H8Q1 611 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 WBP2NLQ6ICG8 309 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 Q6ZT83 130 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 CCDC103Q8IW40 242 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF100Q8IYN0 542 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 CADM2Q8N3J6 435 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 BBS10Q8TAM1 723 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 PIGXQ8TBF5 258 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 S100PBPQ96BU1 408 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 DNAJA3Q96EY1 480 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 USB1Q9BQ65 265 aaKnown RBP9.92□□□□□ -0.82
CKS1B-206ENST00000474215 SIKE1Q9BRV8 207 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 POTEKPQ9BYX7 375 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 CORO2BQ9UQ03 480 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 CHST2Q9Y4C5 530 aa9.92□□□□□ -0.82
CKS1B-206ENST00000474215 A0A0G2JND7 137 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.91□□□□□ -0.82
CKS1B-206ENST00000474215 ZC3H12DA2A288 527 aaKnown RBP9.91□□□□□ -0.82
CKS1B-206ENST00000474215 EVPLLA8MZ36 301 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 CNOT4O95628 575 aaKnown RBP9.91□□□□□ -0.82
CKS1B-206ENST00000474215 ARAFP10398 606 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 IMPDH2P12268 514 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 ETS2P15036 469 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 FPR1P21462 350 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 IL32P24001 234 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 SLC16A1P53985 500 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 CDK6Q00534 326 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 TSC22D1Q15714 1073 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 ACKR1Q16570 336 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 BEX5Q5H9J7 111 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 GCNT6Q5T4J0 391 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 REEP3Q6NUK4 255 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 DLEU7Q6UYE1 221 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 SERPINA11Q86U17 422 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 KRT73Q86Y46 540 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 WFDC8Q8IUA0 241 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 C10orf111Q8N326 155 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 NFKBIDQ8NI38 313 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 HSD17B8Q92506 261 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 KISS1RQ969F8 398 aaPredicted RBP9.91□□□□□ -0.82
CKS1B-206ENST00000474215 SLC35B4Q969S0 331 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 HS3ST6Q96QI5 342 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 NAA11Q9BSU3 229 aaPredicted RBP9.91□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF385DQ9H6B1 395 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 ZNF446Q9NWS9 450 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.91□□□□□ -0.82
CKS1B-206ENST00000474215 PRSS50Q9UI38 385 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 NOSIPQ9Y314 301 aaKnown RBP9.91□□□□□ -0.82
CKS1B-206ENST00000474215 NDUFAF1Q9Y375 327 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 ITPR3Q14573 2671 aa9.91□□□□□ -0.82
CKS1B-206ENST00000474215 TEP1Q99973 2627 aaKnown RBP9.91□□□□□ -0.82
CKS1B-206ENST00000474215 A8MVM7 634 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 RAMP1O60894 148 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 GPIP06744 558 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 EDNRAP25101 427 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 PRKAR1BP31321 381 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 IDUAP35475 653 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 NR1H2P55055 460 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 ADRM1Q16186 407 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 RUNDC3AQ59EK9 446 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 FBXW9Q5XUX1 488 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 ALKBH2Q6NS38 261 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 BHLHA15Q7RTS1 189 aaPredicted RBP9.9□□□□□ -0.82
CKS1B-206ENST00000474215 TGIF2LYQ8IUE0 185 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 UBE2J2Q8N2K1 259 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 DPP10Q8N608 796 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 TSPEARQ8WU66 669 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 APH1AQ96BI3 265 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 PLPPR2Q96GM1 343 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 SPATA5L1Q9BVQ7 753 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 IKZF5Q9H5V7 419 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 TMEM38AQ9H6F2 299 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 UBTD1Q9HAC8 227 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 BEX4Q9NWD9 120 aaPredicted RBP9.9□□□□□ -0.82
CKS1B-206ENST00000474215 PARPBPQ9NWS1 579 aa9.9□□□□□ -0.82
CKS1B-206ENST00000474215 LEF1Q9UJU2 399 aaPredicted RBP9.9□□□□□ -0.82
CKS1B-206ENST00000474215 ABCA4P78363 2273 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 LIPT2A6NK58 231 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 ANGPT2O15123 496 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 MRPL33O75394 65 aaKnown RBP9.89□□□□□ -0.83
CKS1B-206ENST00000474215 LYZL6O75951 148 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 CD99P14209 185 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms