RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 TGIF2LYQ8IUE0 185 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 APH1AQ96BI3 265 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 AURKBQ96GD4 344 aaPredicted RBP18.19■□□□□ 0.5
SNX13-206ENST00000474067 SLC6A13Q9NSD5 602 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 RPS6KB2Q9UBS0 482 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.19■□□□□ 0.5
SNX13-206ENST00000474067 SLC13A4Q9UKG4 626 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 SLC9A8Q9Y2E8 581 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 CSMD1Q96PZ7 3565 aa18.19■□□□□ 0.5
SNX13-206ENST00000474067 CCDC168Q8NDH2 2452 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.18■□□□□ 0.5
SNX13-206ENST00000474067 A8MVM7 634 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 ANGPT2O15123 496 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 GCM2O75603 506 aaPredicted RBP18.18■□□□□ 0.5
SNX13-206ENST00000474067 SERPINB7O75635 380 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 ADAP00813 363 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 TROVE2P10155 538 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNX13-206ENST00000474067 SLC6A2P23975 617 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 GTDC1Q4AE62 458 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 HSP90B2PQ58FF3 399 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 REEP3Q6NUK4 255 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 PAQR6Q6TCH4 344 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 C5orf46Q6UWT4 87 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 BHLHA15Q7RTS1 189 aaPredicted RBP18.18■□□□□ 0.5
SNX13-206ENST00000474067 HMGN2P46Q86SG4 172 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 VRK2Q86Y07 508 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 WFDC8Q8IUA0 241 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 LRRC75A-AS1Q8N1F1 130 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 UBE2J2Q8N2K1 259 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 CADM2Q8N3J6 435 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 S100PBPQ96BU1 408 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 CCL19Q99731 98 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 ADAM19Q9H013 955 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 NDUFAF1Q9Y375 327 aa18.18■□□□□ 0.5
SNX13-206ENST00000474067 AP3D1O14617 1153 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 SMPD2O60906 423 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 BCAS1O75363 584 aaPredicted RBP18.17■□□□□ 0.5
SNX13-206ENST00000474067 VAMP5O95183 116 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 PGM3O95394 542 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 CD53P19397 219 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 CCNA2P20248 432 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 PRKAR1BP31321 381 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 NCALDP61601 193 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 FBXW9Q5XUX1 488 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 ABHD12BQ7Z5M8 362 aaPredicted RBP18.17■□□□□ 0.5
SNX13-206ENST00000474067 P3H2Q8IVL5 708 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 FUNDC1Q8IVP5 155 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 SLC30A8Q8IWU4 369 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 ZNF524Q96C55 264 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 ARL5BQ96KC2 179 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 SF3B5Q9BWJ5 86 aaKnown RBP18.17■□□□□ 0.5
SNX13-206ENST00000474067 TMEM38AQ9H6F2 299 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 UBTD1Q9HAC8 227 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 RLIMQ9NVW2 624 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 SELENONQ9NZV5 590 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 ANGPT4Q9Y264 503 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 POLQO75417 2590 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 CSMD2Q7Z408 3487 aa18.17■□□□□ 0.5
SNX13-206ENST00000474067 OTOGQ6ZRI0 2925 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 SPG11Q96JI7 2443 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 EDF1O60869 148 aaKnown RBP18.16■□□□□ 0.5
SNX13-206ENST00000474067 ARAFP10398 606 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 GGT1P19440 569 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 GTF2E2P29084 291 aaKnown RBP18.16■□□□□ 0.5
SNX13-206ENST00000474067 RIPPLY3P57055 190 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 CDK6Q00534 326 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 TGFBR3Q03167 851 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 TIMM23BQ5SRD1 257 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 OR7E24Q6IFN5 339 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 STK35Q8TDR2 534 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 ZNF300Q96RE9 604 aaPredicted RBP18.16■□□□□ 0.5
SNX13-206ENST00000474067 OR11A1Q9GZK7 315 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 C12orf10Q9HB07 376 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 ASB6Q9NWX5 421 aa18.16■□□□□ 0.5
SNX13-206ENST00000474067 TMEM72A0PK05 275 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 OR6C65A6NJZ3 312 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 C1QCP02747 245 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 FOSL1P15407 271 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 GPX2P18283 190 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 ACAA2P42765 397 aaKnown RBP18.15■□□□□ 0.5
SNX13-206ENST00000474067 H3F3AP84243 136 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 RBBP4Q09028 425 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 CAPRIN1Q14444 709 aaKnown RBP18.15■□□□□ 0.5
SNX13-206ENST00000474067 MAPK11Q15759 364 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 RPS26P11Q5JNZ5 115 aaPredicted RBP18.15■□□□□ 0.5
SNX13-206ENST00000474067 ZNF704Q6ZNC4 412 aaPredicted RBP18.15■□□□□ 0.5
SNX13-206ENST00000474067 PLPPR2Q96GM1 343 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 CXorf56Q9H5V9 222 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 NPHS2Q9NP85 383 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 TAS2R16Q9NYV7 291 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 UPB1Q9UBR1 384 aa18.15■□□□□ 0.5
SNX13-206ENST00000474067 ING1Q9UK53 422 aaPredicted RBP18.15■□□□□ 0.5
SNX13-206ENST00000474067 CIB4A0PJX0 185 aa18.14■□□□□ 0.49
SNX13-206ENST00000474067 ZNF716A6NP11 495 aa18.14■□□□□ 0.49
SNX13-206ENST00000474067 KLF4O43474 513 aa18.14■□□□□ 0.49
SNX13-206ENST00000474067 OR2T1O43869 369 aa18.14■□□□□ 0.49
SNX13-206ENST00000474067 AHSA1O95433 338 aa18.14■□□□□ 0.49
SNX13-206ENST00000474067 THBDP07204 575 aa18.14■□□□□ 0.49
SNX13-206ENST00000474067 CD3EP07766 207 aa18.14■□□□□ 0.49
SNX13-206ENST00000474067 GKN3PP0CG01 181 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms