RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 TIPARPQ7Z3E1 657 aaKnown RBP16.39■□□□□ 0.21
VARS2-206ENST00000473916 SIRT6Q8N6T7 355 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 C10orf53Q8N6V4 93 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 SUMF1Q8NBK3 374 aa16.39■□□□□ 0.21
VARS2-206ENST00000473916 KNTC1P50748 2209 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 IMPA2O14732 288 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 EIF4E2O60573 245 aaKnown RBP16.38■□□□□ 0.21
VARS2-206ENST00000473916 ZFAND5O76080 213 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 GYPBP06028 91 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 SLC6A8P48029 635 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 QPRTQ15274 297 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 ZNF74Q16587 644 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 ISXQ2M1V0 245 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 COL28A1Q2UY09 1125 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 GHDCQ8N2G8 530 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 KISS1RQ969F8 398 aaPredicted RBP16.38■□□□□ 0.21
VARS2-206ENST00000473916 ERMAPQ96PL5 475 aaPredicted RBP16.38■□□□□ 0.21
VARS2-206ENST00000473916 TMEM43Q9BTV4 400 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 FGF20Q9NP95 211 aaPredicted RBP16.38■□□□□ 0.21
VARS2-206ENST00000473916 TOR4AQ9NXH8 423 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 CHRNA9Q9UGM1 479 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 IER3IP1Q9Y5U9 82 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 PCSK5Q92824 1860 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 NDUFB2O95178 105 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 BCL10O95999 233 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 HTR1FP30939 366 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 SLC6A6P31641 620 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 RPS4XP62701 263 aaKnown RBP16.38■□□□□ 0.21
VARS2-206ENST00000473916 EP300Q09472 2414 aaPredicted RBP16.38■□□□□ 0.21
VARS2-206ENST00000473916 ITGADQ13349 1161 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 SPHARQ15513 63 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 KLHL12Q53G59 568 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 KLHL22Q53GT1 634 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 ALPK2Q86TB3 2170 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 LHFPL3Q86UP9 236 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 SLC37A3Q8NCC5 494 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 SDR9C7Q8NEX9 313 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 OR10G3Q8NGC4 313 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 OR2Y1Q8NGV0 311 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 OR8K3Q8NH51 312 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 B4GALNT2Q8NHY0 566 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 GPR119Q8TDV5 335 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 ELP5Q8TE02 316 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 ZFAND2BQ8WV99 257 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 MND1Q9BWT6 205 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 SLC19A3Q9BZV2 496 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 FN3KQ9H479 309 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 MMP25Q9NPA2 562 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 TMEM9BQ9NQ34 198 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 KLHL1Q9NR64 748 aa16.38■□□□□ 0.21
VARS2-206ENST00000473916 LOC100506127A0A0U1RQW1 187 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 MYL12BO14950 172 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 AIREO43918 545 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 LIMS3P0CW19 117 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 LIMS4P0CW20 117 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 HIST1H1CP16403 213 aaKnown RBP16.37■□□□□ 0.21
VARS2-206ENST00000473916 AQP2P41181 271 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 RPS5P46782 204 aaKnown RBP16.37■□□□□ 0.21
VARS2-206ENST00000473916 P2RX1P51575 399 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 RPS3AP61247 264 aaKnown RBP16.37■□□□□ 0.21
VARS2-206ENST00000473916 ROR2Q01974 943 aaKnown RBP16.37■□□□□ 0.21
VARS2-206ENST00000473916 CBFBQ13951 182 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 EFR3AQ14156 821 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 C3orf38Q5JPI3 329 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 ATCAYQ86WG3 371 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 OR51G2Q8NGK0 314 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 OR4K13Q8NH42 304 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 SMAP2Q8WU79 429 aaPredicted RBP16.37■□□□□ 0.21
VARS2-206ENST00000473916 RFKQ969G6 155 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 TAAR8Q969N4 342 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 DEFB126Q9BYW3 111 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 OR51V1Q9H2C8 321 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 AKAP7Q9P0M2 348 aaPredicted RBP16.37■□□□□ 0.21
VARS2-206ENST00000473916 ZNF337Q9Y3M9 751 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 AHCTF1Q8WYP5 2266 aa16.37■□□□□ 0.21
VARS2-206ENST00000473916 CCDC182A6NF36 153 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 SNTNA6NMZ2 147 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 BLOC1S5-TXNDC5H3BN57 136 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 LRRTM2O43300 516 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 PEPDP12955 493 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 PGCP20142 388 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 RPL4P36578 427 aaKnown RBP16.36■□□□□ 0.21
VARS2-206ENST00000473916 ERVK-25P63136 954 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 DHRS13Q6UX07 377 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 PROKR2Q8NFJ6 384 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 OR52E2Q8NGJ4 325 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 OR5L2Q8NGL0 311 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 OR9Q1Q8NGQ5 310 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 TBC1D15Q8TC07 691 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 ZPLD1Q8TCW7 415 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 RASL10BQ96S79 203 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 CENPOQ9BU64 300 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 MED11Q9P086 117 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 H2AFY2Q9P0M6 372 aaPredicted RBP16.36■□□□□ 0.21
VARS2-206ENST00000473916 SEC14L4Q9UDX3 406 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 DMXL1Q9Y485 3027 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 PNMA8CA0A1B0GUJ8 204 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 RIIAD1A6NNX1 92 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 C9orf172C9J069 976 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 PRR23D1E9PI22 279 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms