RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ING5Q8WYH8 240 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CDKL2Q92772 493 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PEX13Q92968 403 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 EXT2Q93063 718 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF707Q96C28 371 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TMCO6Q96DC7 493 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ECHDC3Q96DC8 303 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SGF29Q96ES7 293 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CNRIP1Q96F85 164 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CDKN2AIPNLQ96HQ2 116 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ELMO2Q96JJ3 720 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PPP1R36Q96LQ0 422 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 BIRC8Q96P09 236 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CATSPER2Q96P56 530 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 GCNAQ96QF7 691 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PSKH2Q96QS6 385 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PANX3Q96QZ0 392 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MCCC1Q96RQ3 725 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 VAT1Q99536 393 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 RAD9AQ99638 391 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 GPR21Q99679 349 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MAP3K3Q99759 626 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 FERMT1Q9BQL6 677 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC77Q9BR77 488 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 FEM1AQ9BSK4 669 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 NAT9Q9BTE0 207 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TBC1D10AQ9BXI6 508 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TEX12Q9BXU0 123 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 KLHL4Q9C0H6 718 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 NACA2Q9H009 215 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 DRC3Q9H069 523 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 IQCGQ9H095 443 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ABCG8Q9H221 673 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC68Q9H2F9 335 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ADNPQ9H2P0 1102 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 POMKQ9H5K3 350 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 FAM96AQ9H5X1 160 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ALG9Q9H6U8 611 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 WDR55Q9H6Y2 383 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TBC1D17Q9HA65 648 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 NMRAL1Q9HBL8 299 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ZDHHC4Q9NPG8 344 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 HPS4Q9NQG7 708 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SLC35C2Q9NQQ7 365 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SAR1AQ9NR31 198 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MRPL17Q9NRX2 175 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ABCB8Q9NUT2 735 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 GIMAP4Q9NUV9 329 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 NLE1Q9NVX2 485 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ELOVL2Q9NXB9 296 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TAS2R1Q9NYW7 299 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SPG21Q9NZD8 308 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 BFARQ9NZS9 450 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MRPL15Q9P015 296 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 IL17CQ9P0M4 197 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CPSF2Q9P2I0 782 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 THAP10Q9P2Z0 257 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SLC7A8Q9UHI5 535 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CD84Q9UIB8 345 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 LNPEPQ9UIQ6 1025 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF225Q9UK10 706 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 LSM7Q9UK45 103 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 FBXO5Q9UKT4 447 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 RUVBL2Q9Y230 463 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ITM2BQ9Y287 266 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM5Q9Y2B1 443 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 STK38LQ9Y2H1 464 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 L3MBTL1Q9Y468 752 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PCYT1BQ9Y5K3 369 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MAGED1Q9Y5V3 778 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SNX8Q9Y5X2 465 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 IKBKGQ9Y6K9 419 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TNRC6AQ8NDV7 1962 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ROS1P08922 2347 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ICE1Q9Y2F5 2266 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MYO18BQ8IUG5 2567 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CADP27708 2225 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 HEATR1Q9H583 2144 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 UTP20O75691 2785 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 HIVEP3Q5T1R4 2406 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PKDREJQ9NTG1 2253 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CSMD2Q7Z408 3487 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 PKD1L2Q7Z442 2459 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CELSR1Q9NYQ6 3014 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 IGLV3-16A0A075B6K0 115 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 IGLV4-3A0A075B6K6 122 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 KCNE1BA0A087WTH5 132 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GOLGA8QA0A0J9YX86 632 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GLYATL1P3A0A0U1RQE8 302 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 C1orf232A0A0U1RR37 186 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ATP6AP2A0A1C7CYW4 349 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 MAGEB16A2A368 324 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GOLGA8OA6NCC3 632 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ANKUB1A6NFN9 424 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM221A6NGB7 291 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GLOD5A6NK44 160 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 C2orf81A6NN90 581 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 A8MX80 341 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms