RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, human

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD6-208	ENST00000471682	TM9SF2	Q99805	663 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	ZNF426	Q9BUY5	554 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	PRR14	Q9BWN1	585 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	SLC19A3	Q9BZV2	496 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	ANKRD19P	Q9H560	264 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	TMEM185B	Q9H7F4	350 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	COQ10B	Q9H8M1	238 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	IL1RAP	Q9NPH3	570 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	ALKBH4	Q9NXW9	302 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	CLCF1	Q9UBD9	225 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	SLC5A6	Q9Y289	635 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	FAM215A	Q9Y5M1	114 aa		13.72	□□□□□ -0.21
COMMD6-208	ENST00000471682	HTR3E	A5X5Y0	456 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	MBD3L3	A6NE82	208 aa	Predicted RBP	13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	CLCA1	A8K7I4	914 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	CCL21	O00585	134 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	TNFSF11	O14788	317 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	OR2T1	O43869	369 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	FZD7	O75084	574 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	SEMA7A	O75326	666 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	LYPD3	O95274	346 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	IGF2	P01344	180 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	SHC1	P29353	583 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	RBM34	P42696	430 aa	Known RBP	13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	EIF1AX	P47813	144 aa	Known RBP	13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	PER3	P56645	1201 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	PIN1	Q13526	163 aa	Predicted RBP	13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	SGCB	Q16585	318 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	C1QL3	Q5VWW1	255 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	POMZP3	Q6PJE2	187 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	GDF7	Q7Z4P5	450 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	OFCC1	Q8IZS5	231 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	ATP6V1C2	Q8NEY4	427 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	OSTF1	Q92882	214 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	SLC41A3	Q96GZ6	507 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	HS6ST2	Q96MM7	605 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	OR5B2	Q96R09	309 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	EPYC	Q99645	322 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	TTYH2	Q9BSA4	534 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	NDUFAF4	Q9P032	175 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	RIMS3	Q9UJD0	308 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	MCTS1	Q9ULC4	181 aa	Known RBP	13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	A4GNT	Q9UNA3	340 aa		13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	FAM32A	Q9Y421	112 aa	Known RBP	13.71	□□□□□ -0.21
COMMD6-208	ENST00000471682	PHF3	Q92576	2039 aa	Known RBP	13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682		H0YC42	278 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	SULT2B1	O00204	365 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	LRRTM2	O43300	516 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	THY1	P04216	161 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	TFPI	P10646	304 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	MAGEA2	P43356	314 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	DIO1	P49895	249 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	AGFG1	P52594	562 aa	Known RBP	13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	TPD52	P55327	224 aa	Predicted RBP	13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	SLC35A1	P78382	337 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	EGR4	Q05215	589 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	MYBPH	Q13203	477 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	MFSD13A	Q14CX5	517 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	IQCC	Q4KMZ1	466 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	FAM98B	Q52LJ0	330 aa	Known RBP	13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	RIPPLY2	Q5TAB7	128 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	OR2A2	Q6IF42	318 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	FAM86B1	Q8N7N1	296 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	MFSD8	Q8NHS3	518 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	ARL5B	Q96KC2	179 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	ZNF347	Q96SE7	839 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	PRSS27	Q9BQR3	290 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	SLC7A7	Q9UM01	511 aa		13.7	□□□□□ -0.22
COMMD6-208	ENST00000471682	MYO7B	Q6PIF6	2116 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	IGKV1D-42	A0A075B6H8	117 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	TRAV36DV7	A0A075B6V5	113 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682		A0A1W2PNR3	127 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	TCRBV3S1	A0A5B6	114 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	SLC22A20	A6NK97	555 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	CXCL13	O43927	109 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	EIF1B	O60739	113 aa	Known RBP	13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	PRSS23	O95084	383 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	AHSA1	O95433	338 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	SYNGR4	O95473	234 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	FABP3	P05413	133 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	GPI	P06744	558 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	CRH	P06850	196 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	GLI4	P10075	376 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	CEACAM8	P31997	349 aa	Predicted RBP	13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	IDUA	P35475	653 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	SMIM11A	P58511	58 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	VLDLR	P98155	873 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	CHRNB3	Q05901	458 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	FAM69A	Q5T7M9	428 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	EEF1A1P5	Q5VTE0	462 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	C1orf140	Q5VVS0	124 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	GTF2IRD2B	Q6EKJ0	949 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	TTC33	Q6PID6	262 aa	Predicted RBP	13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	RPTN	Q6XPR3	784 aa		13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	TSEN54	Q7Z6J9	526 aa	Known RBP	13.69	□□□□□ -0.22
COMMD6-208	ENST00000471682	GTF2IRD2	Q86UP8	949 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms