RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 STARD4Q96DR4 205 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 ARL5BQ96KC2 179 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 ARHGDIGQ99819 225 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 SPOCK3Q9BQ16 436 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 OR11A1Q9GZK7 315 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 ENKD1Q9H0I2 346 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 TMEM27Q9HBJ8 222 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 ARL8BQ9NVJ2 186 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 TMEM181Q9P2C4 612 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 ABCD2Q9UBJ2 740 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 BAG5Q9UL15 447 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 USP22Q9UPT9 525 aa13.67□□□□□ -0.22
SDC3-203ENST00000471567 A8MVM7 634 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 MSTNO14793 375 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 PRKD3O94806 890 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 PLGP00747 810 aaPredicted RBP13.66□□□□□ -0.22
SDC3-203ENST00000471567 FESP07332 822 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 IGFBP2P18065 325 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 ENPP1P22413 925 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 HTR2AP28223 471 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 PEX19P40855 299 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 CPA2P48052 419 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 NCALDP61601 193 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 ULK3Q6PHR2 472 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 FITM2Q8N6M3 262 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 CNEP1R1Q8N9A8 125 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 STK35Q8TDR2 534 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 RNASE6Q93091 150 aaKnown RBP13.66□□□□□ -0.22
SDC3-203ENST00000471567 ZHX1-C8orf76Q96EF9 292 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 TACO1Q9BSH4 297 aaKnown RBP13.66□□□□□ -0.22
SDC3-203ENST00000471567 ALG2Q9H553 416 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 SPAG4Q9NPE6 437 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 NPDC1Q9NQX5 325 aaPredicted RBP13.66□□□□□ -0.22
SDC3-203ENST00000471567 NDE1Q9NXR1 346 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 EMC9Q9Y3B6 208 aa13.66□□□□□ -0.22
SDC3-203ENST00000471567 UTP20O75691 2785 aaKnown RBP13.66□□□□□ -0.22
SDC3-203ENST00000471567 A0A1B0GWA3 101 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 TMEM229AB2RXF0 380 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 EEF1E1-BLOC1S5C9J1V9 151 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 EEF1E1O43324 174 aaKnown RBP13.65□□□□□ -0.22
SDC3-203ENST00000471567 HNRNPRO43390 633 aaKnown RBP13.65□□□□□ -0.22
SDC3-203ENST00000471567 TPST2O60704 377 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 CYTIPO60759 359 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 CD8BP10966 210 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 PNMTP11086 282 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 COX6B1P14854 86 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 GSK3BP49841 420 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 CTBP2P56545 445 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 SLC35A1P78382 337 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 OR1Q1Q15612 314 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 HIST2H2BCQ6DN03 193 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 BTLAQ7Z6A9 289 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 PGAM4Q8N0Y7 254 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 OR6K3Q8NGY3 331 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 PROX1Q92786 737 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 SLC47A1Q96FL8 570 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 MCHR1Q99705 422 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 WFDC6Q9BQY6 131 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 SLC24A3Q9HC58 644 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 SELENONQ9NZV5 590 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 SLC9A8Q9Y2E8 581 aa13.65□□□□□ -0.22
SDC3-203ENST00000471567 HCFC1P51610 2035 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 A0A0B4J2E0 115 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 A0A1B0GX12 115 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 ZC3H12DA2A288 527 aaKnown RBP13.64□□□□□ -0.23
SDC3-203ENST00000471567 ELOA3DA6NLF2 546 aaPredicted RBP13.64□□□□□ -0.23
SDC3-203ENST00000471567 A8MXE2 369 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 M0R3H8 397 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 SMAD9O15198 467 aaKnown RBP13.64□□□□□ -0.23
SDC3-203ENST00000471567 GSTA4O15217 222 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 EIF1BO60739 113 aaKnown RBP13.64□□□□□ -0.23
SDC3-203ENST00000471567 NPIPB7O75200 414 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 CGAP01215 116 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 IMPDH2P12268 514 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 IDUAP35475 653 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 PCYT1AP49585 367 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 OR2B6P58173 313 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 SIRPAP78324 504 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 PDK3Q15120 406 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 ELOA3BQ3SY89 546 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 CYBRD1Q53TN4 286 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 ALG10BQ5I7T1 473 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 SWT1Q5T5J6 900 aaKnown RBP13.64□□□□□ -0.23
SDC3-203ENST00000471567 VWA1Q6PCB0 445 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 ZNF613Q6PF04 617 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 C5orf46Q6UWT4 87 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 DMRTC2Q8IXT2 367 aaPredicted RBP13.64□□□□□ -0.23
SDC3-203ENST00000471567 ELOA3Q8NG57 546 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 OR6T1Q8NGN1 323 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 BCAS4Q8TDM0 211 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 ABHD3Q8WU67 409 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 SLC38A4Q969I6 547 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 NSL1Q96IY1 281 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 KCTD14Q9BQ13 255 aaPredicted RBP13.64□□□□□ -0.23
SDC3-203ENST00000471567 PRR14Q9BWN1 585 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 PCDHAC1Q9H158 963 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 BCO1Q9HAY6 547 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 PLSCR4Q9NRQ2 329 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 KLHL9Q9P2J3 617 aa13.64□□□□□ -0.23
SDC3-203ENST00000471567 KLHL13Q9P2N7 655 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms