RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 ZNF704Q6ZNC4 412 aaPredicted RBP8.5□□□□□ -1.05
POLR1A-206ENST00000471427 BHLHA15Q7RTS1 189 aaPredicted RBP8.5□□□□□ -1.05
POLR1A-206ENST00000471427 FUNDC1Q8IVP5 155 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 WFDC11Q8NEX6 87 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 OR52P1PQ8NH57 321 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 PIGXQ8TBF5 258 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 LRRC8CQ8TDW0 803 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 VPS33AQ96AX1 596 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 DDIT4LQ96D03 193 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 PLPPR2Q96GM1 343 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 ARMC7Q9H6L4 198 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 ESRP2Q9H6T0 727 aaKnown RBP8.5□□□□□ -1.05
POLR1A-206ENST00000471427 VIPAS39Q9H9C1 493 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 SLC52A3Q9NQ40 469 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 TCF7L2Q9NQB0 619 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 ZNF701Q9NV72 531 aaPredicted RBP8.5□□□□□ -1.05
POLR1A-206ENST00000471427 RLIMQ9NVW2 624 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 PARPBPQ9NWS1 579 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 IFT52Q9Y366 437 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 TMED7Q9Y3B3 224 aa8.5□□□□□ -1.05
POLR1A-206ENST00000471427 USF3Q68DE3 2245 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 A0A096LPI6 279 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 TMEM72A0PK05 275 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 CLIC1O00299 241 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 HS3ST1O14792 307 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 POLR3GO15318 223 aaPredicted RBP8.49□□□□□ -1.05
POLR1A-206ENST00000471427 TFPIP10646 304 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 ETFAP13804 333 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 ETS2P15036 469 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 TACR3P29371 465 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 NTF4P34130 210 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 WBP2NLQ6ICG8 309 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 PAQR6Q6TCH4 344 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 SEZ6L2Q6UXD5 910 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 HMGN2P46Q86SG4 172 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 BIVMQ86UB2 503 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 WFDC8Q8IUA0 241 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 P3H2Q8IVL5 708 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 ZNF100Q8IYN0 542 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 ZNF433Q8N7K0 673 aaPredicted RBP8.49□□□□□ -1.05
POLR1A-206ENST00000471427 OR9I1Q8NGQ6 314 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 LILRB1Q8NHL6 650 aaPredicted RBP8.49□□□□□ -1.05
POLR1A-206ENST00000471427 PNPT1Q8TCS8 783 aaKnown RBP8.49□□□□□ -1.05
POLR1A-206ENST00000471427 MUCL1Q96DR8 90 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 BOD1Q96IK1 185 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 C18orf12Q96KH6 178 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 MUS81Q96NY9 551 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 ZNF300Q96RE9 604 aaPredicted RBP8.49□□□□□ -1.05
POLR1A-206ENST00000471427 CCL19Q99731 98 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 NAA11Q9BSU3 229 aaPredicted RBP8.49□□□□□ -1.05
POLR1A-206ENST00000471427 SF3B5Q9BWJ5 86 aaKnown RBP8.49□□□□□ -1.05
POLR1A-206ENST00000471427 SPATA9Q9BWV2 254 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 OR11A1Q9GZK7 315 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 PAIP1Q9H074 479 aaKnown RBP8.49□□□□□ -1.05
POLR1A-206ENST00000471427 UBTD1Q9HAC8 227 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 A4GALTQ9NPC4 353 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 SLCO1B3Q9NPD5 702 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 PRSS50Q9UI38 385 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 NOSIPQ9Y314 301 aaKnown RBP8.49□□□□□ -1.05
POLR1A-206ENST00000471427 CHST2Q9Y4C5 530 aa8.49□□□□□ -1.05
POLR1A-206ENST00000471427 RAI1Q7Z5J4 1906 aaPredicted RBP8.48□□□□□ -1.05
POLR1A-206ENST00000471427 NIPBLQ6KC79 2804 aaeCLIP8.48□□□□□ -1.05
POLR1A-206ENST00000471427 FAM171A2A8MVW0 826 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 HMGB1P1B2RPK0 211 aaPredicted RBP8.48□□□□□ -1.05
POLR1A-206ENST00000471427 PDLIM1O00151 329 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 AP3D1O14617 1153 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 NPIPB7O75200 414 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 MRPL33O75394 65 aaKnown RBP8.48□□□□□ -1.05
POLR1A-206ENST00000471427 VAMP5O95183 116 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 PLAUP00749 431 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 IMPDH2P12268 514 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 GGT1P19440 569 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 IGHV1-2P23083 117 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 PPIBP23284 216 aaKnown RBP8.48□□□□□ -1.05
POLR1A-206ENST00000471427 CXCR1P25024 350 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 EDNRAP25101 427 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 ATP4BP51164 291 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 OR2B6P58173 313 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 STX1BP61266 288 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 COPZ1P61923 177 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 SLC17A1Q14916 467 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 TSC22D1Q15714 1073 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 TTMPQ5BVD1 217 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 C6orf10Q5SRN2 563 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 OR7E24Q6IFN5 339 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 HDXQ7Z353 690 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 VRK2Q86Y07 508 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 CCDC103Q8IW40 242 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 CLIP4Q8N3C7 705 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 STK35Q8TDR2 534 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 AKAP1Q92667 903 aaKnown RBP eCLIP8.48□□□□□ -1.05
POLR1A-206ENST00000471427 APH1AQ96BI3 265 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
POLR1A-206ENST00000471427 SPDL1Q96EA4 605 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 TMEM19Q96HH6 336 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 RADILQ96JH8 1075 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 EBF4Q9BQW3 602 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 GRIP2Q9C0E4 1043 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 RABEP2Q9H5N1 569 aa8.48□□□□□ -1.05
POLR1A-206ENST00000471427 CXorf56Q9H5V9 222 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms