RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CXorf36Q9H7Y0 433 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 MEAF6Q9HAF1 191 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 SIRT3Q9NTG7 399 aaPredicted RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 PNPOQ9NVS9 261 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 ASIC5Q9NY37 505 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 MCTS1Q9ULC4 181 aaKnown RBP5.16□□□□□ -1.58
VARS-222ENST00000470953 PROCRQ9UNN8 238 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 STARD9Q9P2P6 4700 aa5.16□□□□□ -1.58
VARS-222ENST00000470953 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 A0A087WZY1 265 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 NPIPA5A0A0B4J1W7 369 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 OR2M5A3KFT3 312 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 POM121CA8CG34 1229 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 C17orf51A8MQB3 221 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 ALG1L2C9J202 215 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 C9JVG2 144 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 NPIPA7E9PJI5 369 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 M0QZ24 198 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 SDHDO14521 159 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 EIF1AYO14602 144 aaKnown RBP5.15□□□□□ -1.59
VARS-222ENST00000470953 FADS1O60427 444 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 STX11O75558 287 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 TSPAN15O95858 294 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 IGKV1D-16P01601 117 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 NGFRP08138 427 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 NPIPA8P0DM63 369 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 UBL4AP11441 157 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 UQCRBP14927 111 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 MATN1P21941 496 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 UQCRC2P22695 453 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 EPHA3P29320 983 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 SLC7A1P30825 629 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 SFTPDP35247 375 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 EIF1AXP47813 144 aaKnown RBP5.15□□□□□ -1.59
VARS-222ENST00000470953 SLC18A1P54219 525 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 SUMO3P55854 103 aaPredicted RBP5.15□□□□□ -1.59
VARS-222ENST00000470953 CTBP2P56545 445 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 WDR4P57081 412 aaKnown RBP5.15□□□□□ -1.59
VARS-222ENST00000470953 LRRC74AQ0VAA2 488 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 MPP2Q14168 576 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 FGFBP1Q14512 234 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 GPR68Q15743 365 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 GPAT3Q53EU6 434 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 SAMD5Q5TGI4 173 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 OR2A2Q6IF42 318 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 OGFOD2Q6N063 350 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 THSD4Q6ZMP0 1018 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 LRRC34Q8IZ02 419 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 SVOPLQ8N434 492 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 FADS6Q8N9I5 356 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 ATP6V1C2Q8NEY4 427 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 TOR1AIP2Q8NFQ8 470 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 OR8J2Q8NGG1 315 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 FNDC9Q8TBE3 224 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 PIWIL2Q8TC59 973 aaKnown RBP5.15□□□□□ -1.59
VARS-222ENST00000470953 ZBTB8AQ96BR9 441 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 TESCQ96BS2 214 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 TLCD1Q96CP7 247 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 COQ8BQ96D53 544 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 GIMAP5Q96F15 307 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 ATP6V1G3Q96LB4 118 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 RNF145Q96MT1 663 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 OR52E6Q96RD3 313 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 JMJD8Q96S16 334 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 RBM4BQ9BQ04 359 aaKnown RBP5.15□□□□□ -1.59
VARS-222ENST00000470953 OR51I1Q9H343 314 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 PIGUQ9H490 435 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 WDR55Q9H6Y2 383 aaPredicted RBP5.15□□□□□ -1.59
VARS-222ENST00000470953 RMND5AQ9H871 391 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 RNF122Q9H9V4 155 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 AIG1Q9NVV5 245 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 AURKAIP1Q9NWT8 199 aaPredicted RBP5.15□□□□□ -1.59
VARS-222ENST00000470953 NTMQ9P121 344 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 EMC9Q9Y3B6 208 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 AP4B1Q9Y6B7 739 aa5.15□□□□□ -1.59
VARS-222ENST00000470953 PRSS51A0A1B0GVH4 220 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 A0A1W2PQD3 144 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 B4DXG7 233 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 SHISA8B8ZZ34 492 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 E7EQL1 145 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 NR5A2O00482 541 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 RFXANKO14593 260 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 UBDO15205 165 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 FRS3O43559 492 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 SNNO75324 88 aaPredicted RBP5.14□□□□□ -1.59
VARS-222ENST00000470953 TNFRSF21O75509 655 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 SLC22A3O75751 556 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 PDE5AO76074 875 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 AQP8O94778 261 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 TPPPO94811 219 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 NTN1O95631 604 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 KRT75O95678 551 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 CSTAP01040 98 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 ALDOCP09972 364 aaKnown RBP5.14□□□□□ -1.59
VARS-222ENST00000470953 OR12D1P0DN82 309 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 NR2F1P10589 423 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 ZNF23P17027 643 aa5.14□□□□□ -1.59
VARS-222ENST00000470953 EIF1P41567 113 aaKnown RBP5.14□□□□□ -1.59
VARS-222ENST00000470953 SUCLG1P53597 346 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms