RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 CXCR1P25024 350 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 PCBP3P57721 371 aaKnown RBP12.58□□□□□ -0.4
TOP3B-215ENST00000470338 H3F3AP84243 136 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 RBBP4Q09028 425 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 TRMT5Q32P41 509 aaKnown RBP12.58□□□□□ -0.4
TOP3B-215ENST00000470338 ABLIM2Q6H8Q1 611 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 TFAP2EQ6VUC0 442 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 STAC2Q6ZMT1 411 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 STK32CQ86UX6 486 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 C11orf65Q8NCR3 313 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 ZNF607Q96SK3 696 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 POLDIP3Q9BY77 421 aaKnown RBP12.58□□□□□ -0.4
TOP3B-215ENST00000470338 POTEKPQ9BYX7 375 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 C12orf49Q9H741 205 aa12.58□□□□□ -0.4
TOP3B-215ENST00000470338 CCDC168Q8NDH2 2452 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 IGKV3D-15A0A087WSY6 115 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 ZC3H12DA2A288 527 aaKnown RBP12.57□□□□□ -0.4
TOP3B-215ENST00000470338 PRORSD1PA6NEY8 169 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 BBIP1A8MTZ0 92 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 SLC22A2O15244 555 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 FRS3O43559 492 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 GCM2O75603 506 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-215ENST00000470338 SERPINB7O75635 380 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 MFN2O95140 757 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 IMPDH2P12268 514 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 GZMMP51124 257 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 CYLC2Q14093 348 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-215ENST00000470338 CAPRIN1Q14444 709 aaKnown RBP12.57□□□□□ -0.4
TOP3B-215ENST00000470338 MAPRE2Q15555 327 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 CYP51A1Q16850 503 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 EXOC3L2Q2M3D2 409 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 GLIPR1L2Q4G1C9 344 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 NANOGP8Q6NSW7 305 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 COMTD1Q86VU5 262 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 CADM2Q8N3J6 435 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 BHLHE22Q8NFJ8 381 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-215ENST00000470338 C3orf49Q96BT1 292 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 LRRC58Q96CX6 371 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 ZHX1-C8orf76Q96EF9 292 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 KLHL4Q9C0H6 718 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 CLEC4MQ9H2X3 399 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-215ENST00000470338 NANOGQ9H9S0 305 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 FANCFQ9NPI8 374 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 ANGPT4Q9Y264 503 aa12.57□□□□□ -0.4
TOP3B-215ENST00000470338 ZNF716A6NP11 495 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 A8MVM7 634 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 TMEM229AB2RXF0 380 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 FXYD1O00168 92 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 CASKO14936 926 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 EIF1BO60739 113 aaKnown RBP12.56□□□□□ -0.4
TOP3B-215ENST00000470338 NPIPB7O75200 414 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 PSMB1P20618 241 aaKnown RBP12.56□□□□□ -0.4
TOP3B-215ENST00000470338 AQP1P29972 269 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 OR3A2P47893 321 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 SLC16A1P53985 500 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 OR2B6P58173 313 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 SLC35A1P78382 337 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 HOXC5Q00444 222 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 DMTNQ08495 405 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 MMEL1Q495T6 779 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 REP15Q6BDI9 236 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 C22orf34Q6ZV56 151 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 ATG4DQ86TL0 474 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-215ENST00000470338 CDH24Q86UP0 819 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 LSRQ86X29 649 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-215ENST00000470338 CDC20BQ86Y33 519 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 ARMC8Q8IUR7 673 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 SLC30A8Q8IWU4 369 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 GABRG1Q8N1C3 465 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 LSMEM1Q8N8F7 131 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 OR10A6Q8NH74 314 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 DNAJA3Q96EY1 480 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 ZNF300Q96RE9 604 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-215ENST00000470338 SH3GL1Q99961 368 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 OR10A4Q9H209 315 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 EVA1AQ9H8M9 152 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 KLHL28Q9NXS3 571 aa12.56□□□□□ -0.4
TOP3B-215ENST00000470338 LOC100653049A0A140TA62 436 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 LIPT2A6NK58 231 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 ZNF814B7Z6K7 855 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 M0QX08 132 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 MRASO14807 208 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 KRT34O76011 436 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 HRGP04196 525 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 PPP3CBP16298 524 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 FPR1P21462 350 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 CRYGSP22914 178 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 BNIP2Q12982 314 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 GALNT5Q7Z7M9 940 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 SNX32Q86XE0 403 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 CALHM3Q86XJ0 350 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 CCDC103Q8IW40 242 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 OR8J3Q8NGG0 315 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 PIGXQ8TBF5 258 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 STK35Q8TDR2 534 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 ZNF775Q96BV0 537 aaPredicted RBP12.55□□□□□ -0.4
TOP3B-215ENST00000470338 NAA11Q9BSU3 229 aaPredicted RBP12.55□□□□□ -0.4
TOP3B-215ENST00000470338 MED18Q9BUE0 208 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 HDHD5Q9BXW7 423 aa12.55□□□□□ -0.4
TOP3B-215ENST00000470338 C12orf10Q9HB07 376 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms