RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 EDNRAP25101 427 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 SLC16A1P53985 500 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 H3F3AP84243 136 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 KEAP1Q14145 624 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 LARS2Q15031 903 aaKnown RBP12.47□□□□□ -0.41
COMMD3-208ENST00000470045 P2RY6Q15077 328 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 DEFB113Q30KQ7 82 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 BEX5Q5H9J7 111 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 SFRP5Q5T4F7 317 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 Q6ZT83 130 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 C10orf111Q8N326 155 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 CLIP4Q8N3C7 705 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 STEAP2Q8NFT2 490 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 BBS10Q8TAM1 723 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 SLC35B4Q969S0 331 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 ZHX1-C8orf76Q96EF9 292 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 HDHD5Q9BXW7 423 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 TMEM181Q9P2C4 612 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 IFT52Q9Y366 437 aa12.47□□□□□ -0.41
COMMD3-208ENST00000470045 A0A1W2PP18 115 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 ZC3H12DA2A288 527 aaKnown RBP12.46□□□□□ -0.41
COMMD3-208ENST00000470045 PGM3O95394 542 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 CNOT4O95628 575 aaKnown RBP12.46□□□□□ -0.41
COMMD3-208ENST00000470045 GKN3PP0CG01 181 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 ARAFP10398 606 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 IMPDH2P12268 514 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 ETS2P15036 469 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 COX5AP20674 150 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 ITGADQ13349 1161 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 AGKQ53H12 422 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 SEZ6L2Q6UXD5 910 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 GALNT5Q7Z7M9 940 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 TGIF2LYQ8IUE0 185 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 PIGXQ8TBF5 258 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 MAL2Q969L2 176 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 S100PBPQ96BU1 408 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 DDIT4LQ96D03 193 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 SIKE1Q9BRV8 207 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 TMEM204Q9BSN7 226 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 RSPO3Q9BXY4 272 aaPredicted RBP12.46□□□□□ -0.41
COMMD3-208ENST00000470045 RABEP2Q9H5N1 569 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 IKZF5Q9H5V7 419 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 EMC3Q9P0I2 261 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 PRSS50Q9UI38 385 aa12.46□□□□□ -0.41
COMMD3-208ENST00000470045 DSCAMO60469 2012 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 EIF1BO60739 113 aaKnown RBP12.45□□□□□ -0.42
COMMD3-208ENST00000470045 RAMP1O60894 148 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 ADAP00813 363 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 PRG2P13727 222 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 GPX2P18283 190 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 CCNA2P20248 432 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 NR1H2P55055 460 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 TSC22D1Q15714 1073 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 WBP2NLQ6ICG8 309 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 DLEU7Q6UYE1 221 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 LSRQ86X29 649 aaPredicted RBP12.45□□□□□ -0.42
COMMD3-208ENST00000470045 KISS1RQ969F8 398 aaPredicted RBP12.45□□□□□ -0.42
COMMD3-208ENST00000470045 DNAJA3Q96EY1 480 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 PIP5K1AQ99755 562 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 USB1Q9BQ65 265 aaKnown RBP12.45□□□□□ -0.42
COMMD3-208ENST00000470045 CPPED1Q9BRF8 314 aaPredicted RBP12.45□□□□□ -0.42
COMMD3-208ENST00000470045 TMUB1Q9BVT8 246 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 POTEKPQ9BYX7 375 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 TMEM38AQ9H6F2 299 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 ARMC7Q9H6L4 198 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 NPHS2Q9NP85 383 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 BEX4Q9NWD9 120 aaPredicted RBP12.45□□□□□ -0.42
COMMD3-208ENST00000470045 ZNF232Q9UNY5 417 aa12.45□□□□□ -0.42
COMMD3-208ENST00000470045 FLNAP21333 2647 aaKnown RBP12.44□□□□□ -0.42
COMMD3-208ENST00000470045 TMEM229AB2RXF0 380 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 GPR171O14626 319 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 IL32P24001 234 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 PRKAR1BP31321 381 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 NTF4P34130 210 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 OR2B6P58173 313 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 SLC35A1P78382 337 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 TAB1Q15750 504 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 ACKR1Q16570 336 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 ZNF311Q5JNZ3 666 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 GCNT6Q5T4J0 391 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 PAQR6Q6TCH4 344 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 SERPINA11Q86U17 422 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 WFDC8Q8IUA0 241 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 KRTAP1-3Q8IUG1 177 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 CCDC103Q8IW40 242 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 DPP10Q8N608 796 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 NFKBIDQ8NI38 313 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 TSPEARQ8WU66 669 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 IGFBPL1Q8WX77 278 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 C3orf49Q96BT1 292 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 ZNF775Q96BV0 537 aaPredicted RBP12.44□□□□□ -0.42
COMMD3-208ENST00000470045 THOC1Q96FV9 657 aaKnown RBP12.44□□□□□ -0.42
COMMD3-208ENST00000470045 CACYBPQ9HB71 228 aaKnown RBP12.44□□□□□ -0.42
COMMD3-208ENST00000470045 ZNF446Q9NWS9 450 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 MALT1Q9UDY8 824 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 LEF1Q9UJU2 399 aaPredicted RBP12.44□□□□□ -0.42
COMMD3-208ENST00000470045 DCTN4Q9UJW0 460 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 TRIM33Q9UPN9 1127 aa12.44□□□□□ -0.42
COMMD3-208ENST00000470045 CORO2BQ9UQ03 480 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms