RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 UPRTQ96BW1 309 aa13.47□□□□□ -0.25
CBWD3-205ENST00000469687 CLIP3Q96DZ5 547 aa13.47□□□□□ -0.25
CBWD3-205ENST00000469687 KCNJ15Q99712 375 aa13.47□□□□□ -0.25
CBWD3-205ENST00000469687 TTYH2Q9BSA4 534 aa13.47□□□□□ -0.25
CBWD3-205ENST00000469687 WACQ9BTA9 647 aa13.47□□□□□ -0.25
CBWD3-205ENST00000469687 NLKQ9UBE8 527 aa13.47□□□□□ -0.25
CBWD3-205ENST00000469687 RPS6KB2Q9UBS0 482 aa13.47□□□□□ -0.25
CBWD3-205ENST00000469687 ST6GALNAC2Q9UJ37 374 aa13.47□□□□□ -0.25
CBWD3-205ENST00000469687 PCDHGB7Q9Y5F8 929 aa13.47□□□□□ -0.25
CBWD3-205ENST00000469687 RP1P56715 2156 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 IGHV5-51A0A0C4DH38 117 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 SERINC4A6NH21 518 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 IDH3BO43837 385 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 NDUFB2O95178 105 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 IFNGP01579 166 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 PROS1P07225 676 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 F8A1P23610 371 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 GABRA4P48169 554 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 RIN1Q13671 783 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 QPRTQ15274 297 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 ZFP69Q49AA0 526 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 SAMD12Q8N8I0 201 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 ZNF615Q8N8J6 731 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 RASD2Q96D21 266 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 SGTBQ96EQ0 304 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 TGM7Q96PF1 710 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 NMNAT3Q96T66 252 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 KLHDC3Q9BQ90 382 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 MOV10Q9HCE1 1003 aaKnown RBP13.46□□□□□ -0.25
CBWD3-205ENST00000469687 RBFOX1Q9NWB1 397 aaKnown RBP13.46□□□□□ -0.25
CBWD3-205ENST00000469687 BAIAP2Q9UQB8 552 aa13.46□□□□□ -0.25
CBWD3-205ENST00000469687 MRPS33Q9Y291 106 aaKnown RBP13.46□□□□□ -0.25
CBWD3-205ENST00000469687 A0A087WUJ7 227 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 A0A0B4J203 849 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 OIP5O43482 229 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 SRPX2O60687 465 aaPredicted RBP13.45□□□□□ -0.26
CBWD3-205ENST00000469687 NSA2O95478 260 aaKnown RBP13.45□□□□□ -0.26
CBWD3-205ENST00000469687 TCEA1P23193 301 aaKnown RBP13.45□□□□□ -0.26
CBWD3-205ENST00000469687 RPL4P36578 427 aaKnown RBP13.45□□□□□ -0.26
CBWD3-205ENST00000469687 FUT7Q11130 342 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 GAS6Q14393 721 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 KCNAB1Q14722 419 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 TATDN3Q17R31 274 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 ACSM3Q53FZ2 586 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 PLET1Q6UQ28 207 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 PXKQ7Z7A4 578 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 OR51Q1Q8NH59 317 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 LMX1AQ8TE12 382 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 ZNF524Q96C55 264 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 TCTN2Q96GX1 697 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 SPRTNQ9H040 489 aaPredicted RBP13.45□□□□□ -0.26
CBWD3-205ENST00000469687 MKKSQ9NPJ1 570 aaPredicted RBP13.45□□□□□ -0.26
CBWD3-205ENST00000469687 SOHLH2Q9NX45 425 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 COPS3Q9UNS2 423 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 SPAG17Q6Q759 2223 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 IGKV1D-42A0A075B6H8 117 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 OR6C68A6NDL8 312 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 A6NL46 340 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 CHURC1-FNTBB4DL54 471 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 CLDN4O14493 209 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 SELENOFO60613 162 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 SLC19A2O60779 497 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 SERPINI2O75830 405 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 FNTBP49356 437 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 CD83Q01151 205 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 CD226Q15762 336 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 CCDC85BQ15834 202 aaPredicted RBP13.45□□□□□ -0.26
CBWD3-205ENST00000469687 NKAIN2Q5VXU1 208 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 ZNF57Q68EA5 555 aaPredicted RBP13.45□□□□□ -0.26
CBWD3-205ENST00000469687 ACOT12Q8WYK0 555 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 C3orf49Q96BT1 292 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 PELI1Q96FA3 418 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 SLC38A3Q99624 504 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 G6PC3Q9BUM1 346 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 CYSLTR2Q9NS75 346 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 ADAM30Q9UKF2 790 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 ZNF346Q9UL40 294 aaKnown RBP13.45□□□□□ -0.26
CBWD3-205ENST00000469687 CLEC4AQ9UMR7 237 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 PCNX3Q9H6A9 2034 aa13.45□□□□□ -0.26
CBWD3-205ENST00000469687 FAM240BA0A1B0GVZ2 78 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 FAM171A2A8MVW0 826 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 PSMD9O00233 223 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 GUSBP08236 651 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 PRKAR1AP10644 381 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 MLLT3P42568 568 aaPredicted RBP13.44□□□□□ -0.26
CBWD3-205ENST00000469687 FASLGP48023 281 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 AGFG1P52594 562 aaKnown RBP13.44□□□□□ -0.26
CBWD3-205ENST00000469687 ERVK-25P63136 954 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 CBLN3Q6UW01 205 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 NPEPL1Q8NDH3 523 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 OR6C4Q8NGE1 309 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 MOSPD2Q8NHP6 518 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 SLC2A12Q8TD20 617 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 PLSCR3Q9NRY6 295 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 ICAM5Q9UMF0 924 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 UNC13CQ8NB66 2214 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 IGHV1OR15-9A0A0B4J2B8 117 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 EFCAB7A8K855 629 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 SOX30O94993 753 aa13.44□□□□□ -0.26
CBWD3-205ENST00000469687 GPR143P51810 404 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms