RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 KIR2DS2P43631 304 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 OC90Q02509 493 aaPredicted RBP3.71□□□□□ -1.82
LSM5-209ENST00000468872 ELAVL3Q14576 367 aaKnown RBP3.71□□□□□ -1.82
LSM5-209ENST00000468872 MESDQ14696 234 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 LRRC23Q53EV4 343 aaPredicted RBP3.71□□□□□ -1.82
LSM5-209ENST00000468872 OR2B11Q5JQS5 317 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 METTL11BQ5VVY1 283 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 CCDC80Q76M96 950 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 FBXO16Q8IX29 292 aaPredicted RBP3.71□□□□□ -1.82
LSM5-209ENST00000468872 CLEC4FQ8N1N0 589 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 ZCCHC7Q8N3Z6 543 aaKnown RBP3.71□□□□□ -1.82
LSM5-209ENST00000468872 CATSPER1Q8NEC5 780 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 OR4D9Q8NGE8 314 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 PAQR8Q8TEZ7 354 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 MS4A14Q96JA4 679 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 MAGT1Q9H0U3 335 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 Q9H3A6 140 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 ZNF702PQ9H963 129 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 FANCFQ9NPI8 374 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 TNFRSF19Q9NS68 423 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 VNN3Q9NY84 501 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 WARS2Q9UGM6 360 aaKnown RBP3.71□□□□□ -1.82
LSM5-209ENST00000468872 KLHL21Q9UJP4 597 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 TP53TG3Q9ULZ0 132 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 CA5BQ9Y2D0 317 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 SLCO1B1Q9Y6L6 691 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 NKTRP30414 1462 aaKnown RBP3.71□□□□□ -1.82
LSM5-209ENST00000468872 NCOA2Q15596 1464 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 ARHGAP35Q9NRY4 1499 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 LAMB4A4D0S4 1761 aa3.71□□□□□ -1.82
LSM5-209ENST00000468872 SMIM28A0A1B0GU29 152 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 A0A1B0GWB2 263 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 VSTM2BA6NLU5 285 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 KIF2AO00139 706 aaPredicted RBP3.7□□□□□ -1.82
LSM5-209ENST00000468872 CXCL11O14625 94 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 PRKYO43930 277 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 GNA14O95837 355 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 IGHV3-23P01764 117 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 P0C879 139 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 EPHX2P34913 555 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 CASP4P49662 377 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 PRKXP51817 358 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 BCL2L1Q07817 233 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 GANABQ14697 944 aaKnown RBP3.7□□□□□ -1.82
LSM5-209ENST00000468872 KIAA0040Q15053 153 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 PDK3Q15120 406 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 MAJINQ3KP22 176 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 ZNF658Q5TYW1 1059 aaPredicted RBP3.7□□□□□ -1.82
LSM5-209ENST00000468872 TPGS2Q68CL5 300 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 PMF1Q6P1K2 205 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 FRA10AC1Q70Z53 315 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 MOB1BQ7L9L4 216 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 TRPM8Q7Z2W7 1104 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 SKA3Q8IX90 412 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 ZNF679Q8IYX0 411 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 ZPLD1Q8TCW7 415 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 SLC35A5Q9BS91 424 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 NIPSNAP3BQ9BS92 247 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 TUBGCP2Q9BSJ2 902 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 RNF126Q9BV68 326 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 SPATA16Q9BXB7 569 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 NAT10Q9H0A0 1025 aaKnown RBP3.7□□□□□ -1.82
LSM5-209ENST00000468872 LRRN3Q9H3W5 708 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 ONECUT1Q9UBC0 465 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 CLEC4EQ9ULY5 219 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 CLEC4AQ9UMR7 237 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 ERVW-1Q9UQF0 538 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 POLDIP2Q9Y2S7 368 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 TIMM10BQ9Y5J6 103 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 MYOM2P54296 1465 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 IQGAP2Q13576 1575 aa3.7□□□□□ -1.82
LSM5-209ENST00000468872 GPATCH8Q9UKJ3 1502 aaKnown RBP3.7□□□□□ -1.82
LSM5-209ENST00000468872 WRNQ14191 1432 aaPredicted RBP eCLIP3.7□□□□□ -1.82
LSM5-209ENST00000468872 EYSQ5T1H1 3165 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 N4BP1O75113 896 aaKnown RBP3.69□□□□□ -1.82
LSM5-209ENST00000468872 SERF1AO75920 110 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 CAPN1P07384 714 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 OR8U8P0C7N1 319 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 POLR2EP19388 210 aaKnown RBP3.69□□□□□ -1.82
LSM5-209ENST00000468872 IGLV3-21P80748 117 aaPredicted RBP3.69□□□□□ -1.82
LSM5-209ENST00000468872 AANATQ16613 207 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 EXOC3L2Q2M3D2 409 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 ZSCAN25Q6NSZ9 544 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 UBQLNLQ8IYU4 475 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 ZBED8Q8IZ13 594 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 SLC41A3Q96GZ6 507 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 COQ2Q96H96 371 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 SERAC1Q96JX3 654 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 IL4I1Q96RQ9 567 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 SECISBP2Q96T21 854 aaKnown RBP3.69□□□□□ -1.82
LSM5-209ENST00000468872 NPAS2Q99743 824 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 ZNF670Q9BS34 389 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 NANSQ9NR45 359 aa3.69□□□□□ -1.82
LSM5-209ENST00000468872 C6orf203Q9P0P8 240 aaPredicted RBP3.69□□□□□ -1.82
LSM5-209ENST00000468872 LAMA2P24043 3122 aaKnown RBP3.68□□□□□ -1.82
LSM5-209ENST00000468872 FLNBO75369 2602 aaKnown RBP3.68□□□□□ -1.82
LSM5-209ENST00000468872 RANBP2P49792 3224 aaKnown RBP3.68□□□□□ -1.82
LSM5-209ENST00000468872 AGRNO00468 2067 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 IGHV1OR15-1A0A075B7D0 117 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 TRAV26-1A0A087WT03 109 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms