RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 KIF17Q9P2E2 1029 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 LAMP5Q9UJQ1 280 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 FBXL2Q9UKC9 423 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 NTNG1Q9Y2I2 539 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 CACNA1BQ00975 2339 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 CPSF4LA6NMK7 179 aaKnown RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 FFAR1O14842 300 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 EIF4E2O60573 245 aaKnown RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 SULT1C4O75897 302 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 SNX4O95219 450 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 CST1P01037 141 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 SP1P08047 785 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 CD46P15529 392 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 CNR1P21554 472 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 HTR2AP28223 471 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 CHN2P52757 468 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 PIN1Q13526 163 aaPredicted RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 TOMM34Q15785 309 aaPredicted RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 NADK2Q4G0N4 442 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF766Q5HY98 468 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 ENTPD8Q5MY95 495 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 SLC25A25Q6KCM7 469 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 IGFL3Q6UXB1 125 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 PIWIL3Q7Z3Z3 882 aaKnown RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 STK32CQ86UX6 486 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 RANBP3LQ86VV4 465 aaPredicted RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 SULF2Q8IWU5 870 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 OR5W2Q8NH69 310 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 LRTOMTQ8WZ04 291 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 TM9SF4Q92544 642 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF524Q96C55 264 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 GNRHR2Q96P88 292 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 MCHR1Q99705 422 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 PIP5K1AQ99755 562 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 LIN7BQ9HAP6 207 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 PAQR5Q9NXK6 330 aaPredicted RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 TESQ9UGI8 421 aaKnown RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 CACNG2Q9Y698 323 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 ENPP4Q9Y6X5 453 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 PINLYPA6NC86 204 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 SHOXO15266 292 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 NME2P1O60361 137 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 TRIM3O75382 744 aaPredicted RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 PRSS23O95084 383 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 FAM87AP0C7U9 286 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 ITGA2P17301 1181 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 HOXB6P17509 224 aaKnown RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 RHCEP18577 417 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 NME2P22392 152 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 MST1P26927 711 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 HSPA13P48723 471 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 NKX2-5P52952 324 aaPredicted RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 CBFBQ13951 182 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 PXDC1Q5TGL8 231 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 SLX4IPQ5VYV7 408 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 AAGABQ6PD74 315 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 PLCZ1Q86YW0 608 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 CDH26Q8IXH8 852 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF440Q8IYI8 595 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 LILRA2Q8N149 483 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 ZADH2Q8N4Q0 377 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 OR2M7Q8NG81 312 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 OR1J4Q8NGS1 313 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 TRIM63Q969Q1 353 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 SCMH1Q96GD3 660 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF486Q96H40 463 aaPredicted RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 TMEM41AQ96HV5 264 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 ARL5BQ96KC2 179 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 C5orf34Q96MH7 638 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 GAL3ST1Q99999 423 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 TP63Q9H3D4 680 aaPredicted RBP6.24□□□□□ -1.41
SCAF4-204ENST00000467731 DSN1Q9H410 356 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 RHCGQ9UBD6 479 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 A4GNTQ9UNA3 340 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 VDAC3Q9Y277 283 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 TP53TG5Q9Y2B4 290 aa6.24□□□□□ -1.41
SCAF4-204ENST00000467731 IGLV3-32A0A0A0MS00 114 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 PEX1O43933 1283 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 CDC40O60508 579 aaKnown RBP eCLIP6.23□□□□□ -1.41
SCAF4-204ENST00000467731 POU2F1P14859 743 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 RFC3P40938 356 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 IDH2P48735 452 aaKnown RBP6.23□□□□□ -1.41
SCAF4-204ENST00000467731 TAS2R41P59536 307 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 FOXO1Q12778 655 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 PPP1R8Q12972 351 aaKnown RBP6.23□□□□□ -1.41
SCAF4-204ENST00000467731 OR1Q1Q15612 314 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 LINC00303Q3SY05 128 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 TIGD3Q6B0B8 471 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 ARSKQ6UWY0 536 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 FADS6Q8N9I5 356 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 TMEM178AQ8NBL3 297 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 OR4K17Q8NGC6 315 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF563Q8TA94 476 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 LHFPL5Q8TAF8 219 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 GPR119Q8TDV5 335 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF597Q96LX8 424 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 PRRC1Q96M27 445 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 FAM173AQ9BQD7 235 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 ARHGAP9Q9BRR9 750 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 MRPS26Q9BYN8 205 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms