RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ZFP92A6NM28 416 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 GOLGA8SH3BPF8 625 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 CLDN9O95484 217 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 TSPAN12O95859 305 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 LY6G6DO95868 133 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 RPS2P15880 293 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 KLK2P20151 261 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 CCR1P32246 355 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 UGT1A5P35504 534 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 DDOSTP39656 456 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 CDH4P55283 916 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 RPS14P62263 151 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 LRRC74AQ0VAA2 488 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 VGLL4Q14135 290 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 MAJINQ3KP22 176 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 TMEM179BQ7Z7N9 219 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 TRIM69Q86WT6 500 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 ZNF100Q8IYN0 542 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 BBS1Q8NFJ9 593 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 DNAJA4Q8WW22 397 aaPredicted RBP3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 RAPGEF5Q92565 580 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 CNOT6LQ96LI5 555 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 CLCC1Q96S66 551 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 HIST1H4GQ99525 98 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 MAPKAP1Q9BPZ7 522 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 KLHDC3Q9BQ90 382 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 YY1AP1Q9H869 796 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 FOLH1BQ9HBA9 442 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 SH2D2AQ9NP31 389 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 POLE4Q9NR33 117 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 MARCH5Q9NX47 278 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 CD274Q9NZQ7 290 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 BTNL2Q9UIR0 455 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 TP53TG3Q9ULZ0 132 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 NPTNQ9Y639 398 aa3.15□□□□□ -1.91
CDC42BPA-211ENST00000466538 VSTM2BA6NLU5 285 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR52A4PA6NMU1 304 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 DCTN6O00399 190 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 HAT1O14929 419 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 ZNF264O43296 627 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 MED7O43513 233 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 TIMM8AO60220 97 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 UGT1A9O60656 530 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 RAMP3O60896 148 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 ATP5LO75964 103 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 DIRAS1O95057 198 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 MX1P20591 662 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 PCMT1P22061 227 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 GABRR1P24046 479 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 HMGB2P26583 209 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 IL12AP29459 219 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 PKNOX1P55347 436 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 ATP5IP56385 69 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 OGDHQ02218 1023 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 DDX39BQ13838 428 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 IMMTQ16891 758 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 RABL6Q3YEC7 729 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 PDZK1Q5T2W1 519 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 VRK2Q86Y07 508 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 TGIF2LXQ8IUE1 241 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 CEND1Q8N111 149 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 FTMTQ8N4E7 242 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 TMEM252Q8N6L7 170 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 MAGEE2Q8TD90 523 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 NT5C3BQ969T7 300 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 C10orf35Q96D05 121 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 CXorf40BQ96DE9 158 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 PAGE5Q96GU1 130 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 C16orf74Q96GX8 76 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 TBX15Q96SF7 602 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 GCOM2Q9BZD3 368 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 PKIBQ9C010 78 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 SUDS3Q9H7L9 328 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 NIPAL2Q9H841 368 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 B4GALT7Q9UBV7 327 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 RPL36Q9Y3U8 105 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 N6AMT1Q9Y5N5 214 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 AGRNO00468 2067 aa3.14□□□□□ -1.91
CDC42BPA-211ENST00000466538 PLEKHH1Q9ULM0 1364 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 A0A0G2JRQ6 117 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 IQANK1A0A1B0GTG1 560 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 CCDC182A6NF36 153 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 A8MXQ7 604 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 HIP1O00291 1037 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 RGS16O15492 202 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 SNX4O95219 450 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 LGI1O95970 557 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 KIR2DS4P43632 304 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 QARSP47897 775 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 BIDP55957 195 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 OXA1LQ15070 435 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 NSUN5P1Q3KNT7 163 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 DMRTC1Q5HYR2 192 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 SAMD4BQ5PRF9 694 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 HSDL2Q6YN16 418 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 SCARA5Q6ZMJ2 495 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 PRR22Q8IZ63 422 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 SPAG16Q8N0X2 631 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 FBXL16Q8N461 479 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 TPD52L3Q96J77 140 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms