RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 MIB2Q96AX9 1013 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 ULK4Q96C45 1275 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 C11orf24Q96F05 449 aaPredicted RBP3.17□□□□□ -1.9
SORT1-202ENST00000466471 ATXN7L3BQ96GX2 97 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 CDKN2AIPNLQ96HQ2 116 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 QRFPRQ96P65 431 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 LRRC3BQ96PB8 259 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 OR14A2Q96R54 314 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 SECISBP2Q96T21 854 aaKnown RBP3.17□□□□□ -1.9
SORT1-202ENST00000466471 MGLLQ99685 303 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 TTYH2Q9BSA4 534 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 TMEM43Q9BTV4 400 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 TBCDQ9BTW9 1192 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 ACAT2Q9BWD1 397 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 HDHD5Q9BXW7 423 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 GPR87Q9BY21 358 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 REG4Q9BYZ8 158 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 SLC29A3Q9BZD2 475 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 TRIM2Q9C040 744 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 CCDC90BQ9GZT6 254 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 C6orf62Q9GZU0 229 aaPredicted RBP3.17□□□□□ -1.9
SORT1-202ENST00000466471 OR51E2Q9H255 320 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 MIXL1Q9H2W2 232 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 IKZF5Q9H5V7 419 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 OPA3Q9H6K4 179 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 CATSPERBQ9H7T0 1116 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 IL1RL2Q9HB29 575 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 HHATLQ9HCP6 504 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 C12orf4Q9NQ89 552 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 MRPL17Q9NRX2 175 aaKnown RBP3.17□□□□□ -1.9
SORT1-202ENST00000466471 SLC6A13Q9NSD5 602 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 DDX28Q9NUL7 540 aaKnown RBP3.17□□□□□ -1.9
SORT1-202ENST00000466471 HPF1Q9NWY4 346 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 NDUFB11Q9NX14 153 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 SLC39A1Q9NY26 324 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 NUDT4Q9NZJ9 180 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 RABL2AQ9UBK7 228 aaPredicted RBP3.17□□□□□ -1.9
SORT1-202ENST00000466471 EPHA6Q9UF33 1036 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 TESQ9UGI8 421 aaKnown RBP3.17□□□□□ -1.9
SORT1-202ENST00000466471 SLC2A6Q9UGQ3 507 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 UBQLN1Q9UMX0 589 aaKnown RBP3.17□□□□□ -1.9
SORT1-202ENST00000466471 DIMT1Q9UNQ2 313 aaKnown RBP3.17□□□□□ -1.9
SORT1-202ENST00000466471 POFUT2Q9Y2G5 429 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 PTRH2Q9Y3E5 179 aaKnown RBP3.17□□□□□ -1.9
SORT1-202ENST00000466471 CMAHPQ9Y471 501 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 ZNF175Q9Y473 711 aa3.17□□□□□ -1.9
SORT1-202ENST00000466471 ARID2Q68CP9 1835 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 ZNF106Q9H2Y7 1883 aaKnown RBP3.16□□□□□ -1.9
SORT1-202ENST00000466471 TRDV1A0A1B0GX56 115 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 TMEM129A0AVI4 362 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 KRTAP23-1A1A580 65 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 FABP12A6NFH5 140 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 MFSD2BA6NFX1 497 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 CBY3A6NI87 242 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 ANXA2P2A6NMY6 339 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 KRBOX1C9JBD0 128 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 M0QZ92 97 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 OR7A17O14581 309 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 GNGT2O14610 69 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 PGRMC2O15173 223 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 ADAMDEC1O15204 470 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 MPPED1O15442 326 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 FLRT2O43155 660 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 B4GALT5O43286 388 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 RGS14O43566 566 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 CHP2O43745 196 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 PRKYO43930 277 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 TPST2O60704 377 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 NFATC1O95644 943 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 FADS2O95864 444 aaKnown RBP3.16□□□□□ -1.9
SORT1-202ENST00000466471 MT-CYBP00156 380 aaPredicted RBP3.16□□□□□ -1.9
SORT1-202ENST00000466471 OTCP00480 354 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 LALBAP00709 142 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 SERPINA1P01009 418 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 FSHBP01225 129 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 IFNA7P01567 189 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 HIST1H2ABP04908 130 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 FGF1P05230 155 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 FABP3P05413 133 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 HLA-DQB2P05538 268 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 STSP08842 583 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 EBLN1P0CF75 366 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 DBTP11182 482 aaKnown RBP3.16□□□□□ -1.9
SORT1-202ENST00000466471 PEPDP12955 493 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 SLC2A4P14672 509 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 TNNI3P19429 210 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 TNFRSF1AP19438 455 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 HIST1H2ADP20671 130 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 PRKACGP22612 351 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 CBLP22681 906 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 PPIBP23284 216 aaKnown RBP3.16□□□□□ -1.9
SORT1-202ENST00000466471 RPS3P23396 243 aaKnown RBP eCLIP3.16□□□□□ -1.91e-12■□□□□ 10.6
SORT1-202ENST00000466471 F8A1P23610 371 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 NDUFS1P28331 727 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 EPHA2P29317 976 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 PRDX3P30048 256 aaKnown RBP3.16□□□□□ -1.9
SORT1-202ENST00000466471 GDI1P31150 447 aa3.16□□□□□ -1.9
SORT1-202ENST00000466471 HOXA11P31270 313 aaPredicted RBP3.16□□□□□ -1.9
SORT1-202ENST00000466471 TLX1P31314 330 aaPredicted RBP3.16□□□□□ -1.9
SORT1-202ENST00000466471 PCGF2P35227 344 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms