RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SERINC1Q9NRX5 453 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 PAQR5Q9NXK6 330 aaPredicted RBP8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 GALNT8Q9NY28 637 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 PROCRQ9UNN8 238 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 ZNF175Q9Y473 711 aa8.72□□□□□ -1.01
RTFDC1-205ENST00000466260 TRBV5-3A0A0A0MS03 114 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 A0A0G2JPF8 293 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 HNRNPCL2B2RXH8 293 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 HNRNPCL3B7ZW38 293 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 IL18BPO95998 194 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 PABPC4LP0CB38 370 aaKnown RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 HNRNPCL4P0DMR1 293 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 ARAFP10398 606 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 HOXB6P17509 224 aaKnown RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 IGFBP2P18065 325 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 PPIBP23284 216 aaKnown RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 KIR2DL2P43627 348 aaPredicted RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 KIR2DL3P43628 341 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 SLC25A3Q00325 362 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 HOXC5Q00444 222 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 CDK6Q00534 326 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 EPS8Q12929 822 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 FLOT2Q14254 428 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 LARS2Q15031 903 aaKnown RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 CYP51A1Q16850 503 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 SLC25A53Q5H9E4 307 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 REP15Q6BDI9 236 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 TMEM154Q6P9G4 183 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 IZUMO2Q6UXV1 221 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 GRINAQ7Z429 371 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 SERPINA11Q86U17 422 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 PQLC1Q8N2U9 271 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 CLIP4Q8N3C7 705 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 BBS10Q8TAM1 723 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 LINC01560Q8TB33 94 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 ABHD3Q8WU67 409 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 CPNE4Q96A23 557 aaPredicted RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 STARD4Q96DR4 205 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 HOPXQ9BPY8 73 aaPredicted RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 ALG2Q9H553 416 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 A4GALTQ9NPC4 353 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 EXOSC3Q9NQT5 275 aaKnown RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 ACER3Q9NUN7 267 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 GID8Q9NWU2 228 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 THUMPD1Q9NXG2 353 aaKnown RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 CRIM1Q9NZV1 1036 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 RAB26Q9ULW5 256 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 EMC9Q9Y3B6 208 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 SPIN1Q9Y657 262 aaPredicted RBP8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 DSPPQ9NZW4 1301 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 FREM1Q5H8C1 2179 aa8.71□□□□□ -1.02
RTFDC1-205ENST00000466260 TMED7-TICAM2A0A0A6YYA0 188 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 LOC100653049A0A140TA62 436 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 TMEM72A0PK05 275 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 TUBAL3A6NHL2 446 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 FBP2O00757 339 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 MRASO14807 208 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 AIM2O14862 343 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 ADAMDEC1O15204 470 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 DNAJA2O60884 412 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 KRT34O76011 436 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 PGM3O95394 542 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 NTN1O95631 604 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 NPPAP01160 153 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 OPN1SWP03999 348 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 FESP07332 822 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 GUSBP08236 651 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 PRG2P13727 222 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 POU2F1P14859 743 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 UQCRBP14927 111 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 PTNP21246 168 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 ENPP1P22413 925 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 TACR3P29371 465 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 SSTR2P30874 369 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 DIO1P49895 249 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 KRTAP10-9P60411 292 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 EEF1A1P68104 462 aaKnown RBP8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 FAM27E3Q08E93 113 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 BNIP2Q12982 314 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 POU4F3Q15319 338 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 SYT14P1Q58G82 188 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 RUNDC3AQ59EK9 446 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 TMEM201Q5SNT2 666 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 DLEU7Q6UYE1 221 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 FCRLAQ7L513 359 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 FAM214BQ7L5A3 538 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 ARPINQ7Z6K5 226 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 CMIPQ8IY22 773 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 POU5F2Q8N7G0 328 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 ZNF610Q8N9Z0 462 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 RNF217Q8TC41 542 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 OIT3Q8WWZ8 545 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 ZNF775Q96BV0 537 aaPredicted RBP8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 ASB9Q96DX5 294 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 ZC3HAV1LQ96H79 300 aaKnown RBP8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 ARL5BQ96KC2 179 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 CGREF1Q99674 301 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 GPATCH1Q9BRR8 931 aaKnown RBP8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 PIGMQ9H3S5 423 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms