RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 DNAAF1Q8NEP3 725 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 OR2L5Q8NG80 312 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 OR5T2Q8NGG2 359 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 OR5M9Q8NGP3 310 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 OR13C2Q8NGS9 318 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 OR2T27Q8NH04 317 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 OR4C6Q8NH72 309 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 OR1S1Q8NH92 325 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PFN4Q8NHR9 129 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 COQ8AQ8NI60 647 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 RAB40AQ8WXH6 277 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ARRDC3Q96B67 414 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PELI1Q96FA3 418 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 MRPL48Q96GC5 212 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 NRTNQ99748 197 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ZNF416Q9BWM5 594 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 MS4A7Q9GZW8 240 aaPredicted RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 EVA1AQ9H8M9 152 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 C20orf141Q9NUB4 165 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 MRPL15Q9P015 296 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 OPN4Q9UHM6 478 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ICAM5Q9UMF0 924 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 FOXJ3Q9UPW0 622 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PRELID3BQ9Y3B1 194 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PCYT1BQ9Y5K3 369 aaPredicted RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 ZNF780BQ9Y6R6 833 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 A0A1W2PS29 197 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 UBE2QL1A1L167 161 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ANXA2P2A6NMY6 339 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 IFITM5A6NNB3 132 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ABCD4O14678 606 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SELENOFO60613 162 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 LILRB3O75022 631 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PTP4A3O75365 173 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PCDH8O95206 1070 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 DBIP07108 87 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 FUT1P19526 365 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ANXA7P20073 488 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 DDX6P26196 483 aaKnown RBP eCLIP6.73□□□□□ -1.33
USP48-206ENST00000464577 CERS1P27544 350 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SLC6A6P31641 620 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 P2RX1P51575 399 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 MAZP56270 477 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 PPP2CBP62714 309 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PPP2CAP67775 309 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 MAT1AQ00266 395 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 CAP1Q01518 475 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SREBF2Q12772 1141 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ZNF169Q14929 603 aaPredicted RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 OR1Q1Q15612 314 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ETFDHQ16134 617 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 AMZ1Q400G9 498 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 TP53I3Q53FA7 332 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SFRP5Q5T4F7 317 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ALKAL2Q6UX46 152 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ERN2Q76MJ5 926 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 MCATQ8IVS2 390 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 CLRN3Q8NCR9 226 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 TMIEQ8NEW7 156 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 OR2A1Q8NGT9 310 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 WFIKKN2Q8TEU8 576 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PIGKQ92643 395 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 CDS1Q92903 461 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 MARC2Q969Z3 335 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ORAI1Q96D31 301 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 BPIFA2Q96DR5 249 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 POM121Q96HA1 1249 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 DERL3Q96Q80 235 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 OR14A2Q96R54 314 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 CNN2Q99439 309 aaKnown RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 GFI1Q99684 422 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 RAB11FIP5Q9BXF6 653 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ZNF350Q9GZX5 532 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 DNTTIP1Q9H147 329 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SLC25A32Q9H2D1 315 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PCDHB16Q9NRJ7 776 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 C14orf105Q9NVL8 296 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ANKRD10Q9NXR5 420 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 TAS2R10Q9NYW0 307 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SLC23A2Q9UGH3 650 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 SERTAD3Q9UJW9 196 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 FBXO9Q9UK97 447 aaPredicted RBP6.73□□□□□ -1.33
USP48-206ENST00000464577 FBXL21Q9UKT6 434 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 MED31Q9Y3C7 131 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ZNF175Q9Y473 711 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 PCDHGA5Q9Y5G8 931 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 ETV7Q9Y603 341 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 LRRK1Q38SD2 2015 aa6.73□□□□□ -1.33
USP48-206ENST00000464577 A0A1W2PPK0 400 aa6.72□□□□□ -1.33
USP48-206ENST00000464577 F5H5P2 479 aa6.72□□□□□ -1.33
USP48-206ENST00000464577 DNASE2O00115 360 aaPredicted RBP6.72□□□□□ -1.33
USP48-206ENST00000464577 LGALS8O00214 317 aa6.72□□□□□ -1.33
USP48-206ENST00000464577 ARPC5O15511 151 aa6.72□□□□□ -1.33
USP48-206ENST00000464577 TGM5O43548 720 aa6.72□□□□□ -1.33
USP48-206ENST00000464577 RNGTTO60942 597 aaKnown RBP6.72□□□□□ -1.33
USP48-206ENST00000464577 SDC3O75056 442 aa6.72□□□□□ -1.33
USP48-206ENST00000464577 PPP1R3DO95685 299 aa6.72□□□□□ -1.33
USP48-206ENST00000464577 HPP00738 406 aa6.72□□□□□ -1.33
USP48-206ENST00000464577 EGFP01133 1207 aa6.72□□□□□ -1.33
USP48-206ENST00000464577 SLC35G4P0C7Q5 338 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms