RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 BAG5Q9UL15 447 aa18.68■□□□□ 0.58
CD58-204ENST00000464088 MED12LQ86YW9 2145 aa18.68■□□□□ 0.58
CD58-204ENST00000464088 TMED7-TICAM2A0A0A6YYA0 188 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 EIF1AYO14602 144 aaKnown RBP18.67■□□□□ 0.58
CD58-204ENST00000464088 FMO6PO60774 539 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 TCN1P20061 433 aaPredicted RBP18.67■□□□□ 0.58
CD58-204ENST00000464088 ME2P23368 584 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 NUP107P57740 925 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 SELENOWP63302 87 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 CBX1P83916 185 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 SF3B4Q15427 424 aaKnown RBP eCLIP18.67■□□□□ 0.588e-6■□□□□ 8.7
CD58-204ENST00000464088 TMEM176BQ3YBM2 270 aaPredicted RBP18.67■□□□□ 0.58
CD58-204ENST00000464088 GLYATQ6IB77 296 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 TMEM211Q6ICI0 200 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 POMZP3Q6PJE2 187 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 CBLL1Q75N03 491 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 RBM45Q8IUH3 476 aaKnown RBP18.67■□□□□ 0.58
CD58-204ENST00000464088 DMRTC2Q8IXT2 367 aaPredicted RBP18.67■□□□□ 0.58
CD58-204ENST00000464088 ARHGAP24Q8N264 748 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 OR2V1Q8NHB1 315 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 TRIB1Q96RU8 372 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 ZNF559Q9BR84 538 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 COQ10BQ9H8M1 238 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 SERINC1Q9NRX5 453 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 TMED7Q9Y3B3 224 aa18.67■□□□□ 0.58
CD58-204ENST00000464088 TMEM72A0PK05 275 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 GJE1A6NN92 205 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 TOXO94900 526 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 SFTPDP35247 375 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 MSX2P35548 267 aaPredicted RBP18.66■□□□□ 0.58
CD58-204ENST00000464088 PLXDC2Q6UX71 529 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 ATG4DQ86TL0 474 aaPredicted RBP18.66■□□□□ 0.58
CD58-204ENST00000464088 ATP6V1C2Q8NEY4 427 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 OR52E4Q8NGH9 312 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 OR10D3Q8NH80 312 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 SLC25A43Q8WUT9 341 aaPredicted RBP18.66■□□□□ 0.58
CD58-204ENST00000464088 PROX1Q92786 737 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 NINJ1Q92982 152 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 ZNF845Q96IR2 970 aaPredicted RBP18.66■□□□□ 0.58
CD58-204ENST00000464088 TRIM2Q9C040 744 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 PCDHAC1Q9H158 963 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 GORASP2Q9H8Y8 452 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 KCNN3Q9UGI6 736 aa18.66■□□□□ 0.58
CD58-204ENST00000464088 PRPF19Q9UMS4 504 aaKnown RBP18.66■□□□□ 0.58
CD58-204ENST00000464088 A0A1B0GWA3 101 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 MBD3L4A6NDZ8 208 aaPredicted RBP18.65■□□□□ 0.58
CD58-204ENST00000464088 MBD3L3A6NE82 208 aaPredicted RBP18.65■□□□□ 0.58
CD58-204ENST00000464088 MBD3L5A6NJ08 208 aaPredicted RBP18.65■□□□□ 0.58
CD58-204ENST00000464088 TNFSF11O14788 317 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 ZNF208O43345 1280 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 SERPINA1P01009 418 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 KLK2P20151 261 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 TNFRSF1BP20333 461 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 TIMP3P35625 211 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 MAP2K6P52564 334 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 RPS3AP61247 264 aaKnown RBP18.65■□□□□ 0.58
CD58-204ENST00000464088 PMPCAQ10713 525 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 OR1Q1Q15612 314 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 SYT14P1Q58G82 188 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 RANBP3LQ86VV4 465 aaPredicted RBP18.65■□□□□ 0.58
CD58-204ENST00000464088 TSPYL5Q86VY4 417 aaPredicted RBP18.65■□□□□ 0.58
CD58-204ENST00000464088 CARM1Q86X55 608 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 OR10Q1Q8NGQ4 319 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 LILRB4Q8NHJ6 448 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 MBD3L2Q8NHZ7 208 aaPredicted RBP18.65■□□□□ 0.58
CD58-204ENST00000464088 VANGL1Q8TAA9 524 aaPredicted RBP18.65■□□□□ 0.58
CD58-204ENST00000464088 ASB5Q8WWX0 329 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 FAM162AQ96A26 154 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 MCHR1Q99705 422 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 C12orf10Q9HB07 376 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 ADPRHL2Q9NX46 363 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 MAGEL2Q9UJ55 1249 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 SLC9A8Q9Y2E8 581 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 SH3GLB1Q9Y371 365 aa18.65■□□□□ 0.58
CD58-204ENST00000464088 SPIN1Q9Y657 262 aaPredicted RBP18.65■□□□□ 0.58
CD58-204ENST00000464088 A0A0B4J2E0 115 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 A0A1B0GX12 115 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 CXCL13O43927 109 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 CCNA2P20248 432 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 FKBP2P26885 142 aaKnown RBP18.64■□□□□ 0.57
CD58-204ENST00000464088 CEACAM8P31997 349 aaPredicted RBP18.64■□□□□ 0.57
CD58-204ENST00000464088 EIF1AXP47813 144 aaKnown RBP18.64■□□□□ 0.57
CD58-204ENST00000464088 RIPPLY2Q5TAB7 128 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 HBMQ6B0K9 141 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 VTCN1Q7Z7D3 282 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 TMEM200AQ86VY9 491 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 C9orf106Q8NAJ2 232 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 OSTF1Q92882 214 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 WNT2BQ93097 391 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 TPD52L3Q96J77 140 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 OR11A1Q9GZK7 315 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 DCAF13Q9NV06 445 aaKnown RBP18.64■□□□□ 0.57
CD58-204ENST00000464088 PAQR5Q9NXK6 330 aaPredicted RBP18.64■□□□□ 0.57
CD58-204ENST00000464088 SNX13Q9Y5W8 968 aa18.64■□□□□ 0.57
CD58-204ENST00000464088 A0A1W2PNR3 127 aa18.63■□□□□ 0.57
CD58-204ENST00000464088 ZC3H12DA2A288 527 aaKnown RBP18.63■□□□□ 0.57
CD58-204ENST00000464088 ARPC2O15144 300 aa18.63■□□□□ 0.57
CD58-204ENST00000464088 TGM6O95932 706 aa18.63■□□□□ 0.57
CD58-204ENST00000464088 CHRNB4P30926 498 aa18.63■□□□□ 0.57
CD58-204ENST00000464088 CLK1P49759 484 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms