RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 C5orf46Q6UWT4 87 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 HAVCR2Q8TDQ0 301 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 C4orf36Q96KX1 117 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 PLA2G2FQ9BZM2 168 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 SLC25A18Q9H1K4 315 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 LYRM4Q9HD34 91 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 AK6Q9Y3D8 172 aaKnown RBP11.9□□□□□ -0.5
NUP58-206ENST00000463407 SNX11Q9Y5W9 270 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 TRAV36DV7A0A075B6V5 113 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 FOXD2O60548 495 aaPredicted RBP11.9□□□□□ -0.5
NUP58-206ENST00000463407 RAB40BQ12829 278 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 SNTB2Q13425 540 aaKnown RBP11.9□□□□□ -0.5
NUP58-206ENST00000463407 PGGHGQ32M88 737 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 MKXQ8IYA7 352 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 ZNF417Q8TAU3 575 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 SYT3Q9BQG1 590 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 SYT4Q9H2B2 425 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 OTOL1A6NHN0 477 aaPredicted RBP11.9□□□□□ -0.5
NUP58-206ENST00000463407 ZNF322Q6U7Q0 402 aaPredicted RBP11.9□□□□□ -0.5
NUP58-206ENST00000463407 ZNF687Q8N1G0 1237 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 LRRC20Q8TCA0 184 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 P2RY12Q9H244 342 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 USP54Q70EL1 1684 aa11.9□□□□□ -0.5
NUP58-206ENST00000463407 SLC5A10A0PJK1 596 aa11.9□□□□□ -0.51
NUP58-206ENST00000463407 AMY2AP04746 511 aa11.9□□□□□ -0.51
NUP58-206ENST00000463407 TFPTP0C1Z6 253 aa11.9□□□□□ -0.51
NUP58-206ENST00000463407 BIDP55957 195 aa11.9□□□□□ -0.51
NUP58-206ENST00000463407 NTRK2Q16620 822 aa11.9□□□□□ -0.51
NUP58-206ENST00000463407 CHPT1Q8WUD6 406 aa11.9□□□□□ -0.51
NUP58-206ENST00000463407 SLC38A5Q8WUX1 472 aa11.9□□□□□ -0.51
NUP58-206ENST00000463407 EGLN3Q9H6Z9 239 aa11.9□□□□□ -0.51
NUP58-206ENST00000463407 ELOVL3Q9HB03 270 aa11.9□□□□□ -0.51
NUP58-206ENST00000463407 IL21Q9HBE4 155 aa11.9□□□□□ -0.51
NUP58-206ENST00000463407 MAGED1Q9Y5V3 778 aaPredicted RBP11.9□□□□□ -0.51
NUP58-206ENST00000463407 BORCS7-ASMTA0A0B4J1R7 106 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 H7C1C5 153 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 RP2O75695 350 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 CTSLP07711 333 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 EPHA1P21709 976 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 TSFMP43897 325 aaKnown RBP11.89□□□□□ -0.51
NUP58-206ENST00000463407 LCN6P62502 163 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 CCL7P80098 99 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 ARL6IP1Q15041 203 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 SFRP4Q6FHJ7 346 aaPredicted RBP11.89□□□□□ -0.51
NUP58-206ENST00000463407 OR5J2Q8NH18 312 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 COQ8AQ8NI60 647 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 RAB39BQ96DA2 213 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 COQ10AQ96MF6 247 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 MGAT4CQ9UBM8 478 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 B3GNT3Q9Y2A9 372 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 SIPA1L3O60292 1781 aaPredicted RBP11.89□□□□□ -0.51
NUP58-206ENST00000463407 TRBV4-1A0A0J9YWV2 114 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 FAM183AA6NL82 134 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 METTL12A8MUP2 240 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 M0R036 132 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 UBFD1O14562 309 aaKnown RBP11.89□□□□□ -0.51
NUP58-206ENST00000463407 PRRG2O14669 202 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 RFPL3O75679 317 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 CHRNB4P30926 498 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 STT3AP46977 705 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 CCDC71LQ8N9Z2 235 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 TP63Q9H3D4 680 aaPredicted RBP11.89□□□□□ -0.51
NUP58-206ENST00000463407 WNT16Q9UBV4 365 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 DOCK1Q14185 1865 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 PIGBOS1A0A0B4J2F0 54 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 MBTPS2O43462 519 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 EIF1BO60739 113 aaKnown RBP11.89□□□□□ -0.51
NUP58-206ENST00000463407 CBX7O95931 251 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 SERPINA2P20848 420 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 OPRD1P41143 372 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 RPL34P49207 117 aaKnown RBP11.89□□□□□ -0.51
NUP58-206ENST00000463407 IL10RAQ13651 578 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 CXorf36Q9H7Y0 433 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 LRIT2A6NDA9 550 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 MRPS14O60783 128 aaKnown RBP11.89□□□□□ -0.51
NUP58-206ENST00000463407 SNAPC5O75971 98 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 AGBL4Q5VU57 503 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 OR7E24Q6IFN5 339 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 TMEM150AQ86TG1 271 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 ASB17Q8WXJ9 295 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 TOMM40LQ969M1 308 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 IP6K3Q96PC2 410 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 ABCG5Q9H222 651 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 ITGB2P05107 769 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 STOML3Q8TAV4 291 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 CCDC86Q9H6F5 360 aaKnown RBP11.89□□□□□ -0.51
NUP58-206ENST00000463407 PDFQ9HBH1 243 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 USP22Q9UPT9 525 aa11.89□□□□□ -0.51
NUP58-206ENST00000463407 A0A0A6YYH2 397 aa11.88□□□□□ -0.51
NUP58-206ENST00000463407 A0A1W2PQL4 384 aaPredicted RBP11.88□□□□□ -0.51
NUP58-206ENST00000463407 A6NJ64 397 aa11.88□□□□□ -0.51
NUP58-206ENST00000463407 ZNF593O00488 134 aaPredicted RBP11.88□□□□□ -0.51
NUP58-206ENST00000463407 CSO75390 466 aaKnown RBP11.88□□□□□ -0.51
NUP58-206ENST00000463407 GABBR2O75899 941 aa11.88□□□□□ -0.51
NUP58-206ENST00000463407 MSL3P1P0C860 447 aa11.88□□□□□ -0.51
NUP58-206ENST00000463407 GABRG2P18507 467 aa11.88□□□□□ -0.51
NUP58-206ENST00000463407 ACTBP60709 375 aa11.88□□□□□ -0.51
NUP58-206ENST00000463407 GPR85P60893 370 aa11.88□□□□□ -0.51
NUP58-206ENST00000463407 ACTG1P63261 375 aa11.88□□□□□ -0.51
NUP58-206ENST00000463407 P2RY14Q15391 338 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms