RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 BSNQ9UPA5 3926 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 BOD1L1Q8NFC6 3051 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 MED12Q93074 2177 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 A8MVM7 634 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 LINC01387J3KSC0 135 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 SOCS2O14508 198 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 PIP5K1CO60331 668 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 TRAPPC6AO75865 159 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 ALPLP05186 524 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 MAKP20794 623 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 GSSP48637 474 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 PTDSS1P48651 473 aaKnown RBP12.94□□□□□ -0.34
COL6A1-202ENST00000463060 CLK1P49759 484 aaKnown RBP12.94□□□□□ -0.34
COL6A1-202ENST00000463060 DAPP51397 102 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 ARHGDIAP52565 204 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 RAC1P63000 192 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 LTBQ06643 244 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 C1QL3Q5VWW1 255 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 ZNF324BQ6AW86 544 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-202ENST00000463060 KDM4DQ6B0I6 523 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 CD300LDQ6UXZ3 194 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 P3H2Q8IVL5 708 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 NRMQ8IXM6 262 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 CBR4Q8N4T8 237 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 OR9Q2Q8NGE9 314 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 OR6S1Q8NH40 331 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 OR14L1PQ8NHC6 308 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 LIPHQ8WWY8 451 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 PTDSS2Q9BVG9 487 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 DGCR6LQ9BY27 220 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 POTEKPQ9BYX7 375 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 SMURF2Q9HAU4 748 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 PLSCR2Q9NRY7 297 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 C20orf141Q9NUB4 165 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 MGAT4BQ9UQ53 548 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 MED31Q9Y3C7 131 aa12.94□□□□□ -0.34
COL6A1-202ENST00000463060 MPDZO75970 2070 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 A0A1B0GVC2 190 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 ERVH48-1M5A8F1 160 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 ACOT7O00154 380 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 DLGAP1O14490 977 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 ANXA8P13928 327 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 CCNA2P20248 432 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 PTNP21246 168 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 TCEA1P23193 301 aaKnown RBP12.93□□□□□ -0.34
COL6A1-202ENST00000463060 SHC1P29353 583 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 CLDN15P56746 228 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 SELENBP1Q13228 472 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 DAG1Q14118 895 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 NHSL2Q5HYW2 709 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 OTUD3Q5T2D3 398 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-202ENST00000463060 RAET1LQ5VY80 246 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 POMZP3Q6PJE2 187 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 C5orf46Q6UWT4 87 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 ZBTB49Q6ZSB9 765 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 TRILQ7L0X0 811 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 PACRGLQ8N7B6 248 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 RNF217Q8TC41 542 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 TAAR8Q969N4 342 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 EME1Q96AY2 570 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 KTI12Q96EK9 354 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-202ENST00000463060 WBP1Q96G27 269 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 ARL5BQ96KC2 179 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 NIPSNAP1Q9BPW8 284 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 OR11A1Q9GZK7 315 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 SLC25A18Q9H1K4 315 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 SERINC1Q9NRX5 453 aa12.93□□□□□ -0.34
COL6A1-202ENST00000463060 TLN1Q9Y490 2541 aaKnown RBP12.92□□□□□ -0.34
COL6A1-202ENST00000463060 FTCDNL1E5RQL4 147 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 CDC42EP2O14613 210 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 EI24O14681 340 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 OR10H3O60404 316 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 BGLAPP02818 100 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 TP53P04637 393 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-202ENST00000463060 TSPAN19P0C672 248 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 SFTPCP11686 197 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 ZNF24P17028 368 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 ALDH3A2P51648 485 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 FHL1Q13642 323 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 TOMM20Q15388 145 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 LRRC36Q1X8D7 754 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 SYT14P1Q58G82 188 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 C1orf140Q5VVS0 124 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 C3orf33Q6P1S2 294 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 RRM2BQ7LG56 351 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 SLC46A3Q7Z3Q1 461 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 AQP11Q8NBQ7 271 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 NEIL3Q8TAT5 605 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 PIGXQ8TBF5 258 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 GNPDA2Q8TDQ7 276 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 SLC25A43Q8WUT9 341 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-202ENST00000463060 BPIFA2Q96DR5 249 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 KLHL4Q9C0H6 718 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 DEFB127Q9H1M4 99 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 SLC6A15Q9H2J7 730 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 C8orf4Q9NR00 106 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 REV1Q9UBZ9 1251 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 TMEM5Q9Y2B1 443 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 SLC6A5Q9Y345 797 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 LIPGQ9Y5X9 500 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms