RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 WDR26Q9H7D7 661 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 EMC7Q9NPA0 242 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 POT1Q9NUX5 634 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 NUP50Q9UKX7 468 aa11.48□□□□□ -0.57
HDAC4-208ENST00000463007 RPS10-NUDT3A0A1W2PQS6 291 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 EMC8O43402 210 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 RAD1O60671 282 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 IL9P15248 144 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 HK1P19367 917 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 FPR3P25089 353 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 DCTDP32321 178 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 STAT5AP42229 794 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 ANXA11P50995 505 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 PSMA6P60900 246 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 MFSD13AQ14CX5 517 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 EXOSC7Q15024 291 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 RPE65Q16518 533 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 DUSP5Q16690 384 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 SLC25A30Q5SVS4 291 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 MRM1Q6IN84 353 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 C11orf88Q6PI97 169 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 ZNF836Q6ZNA1 936 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 MBOAT2Q6ZWT7 520 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 OR2L8Q8NGY9 312 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 C1orf216Q8TAB5 229 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 OR2M2Q96R28 347 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 GSX2Q9BZM3 304 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 SLC6A20Q9NP91 592 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 TMEM138Q9NPI0 162 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 ADAM18Q9Y3Q7 739 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 LINC00862A6NCI5 91 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 RIIAD1A6NNX1 92 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 PLRG1O43660 514 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 RASGRP1O95267 797 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 IGHA1P01876 353 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 APOC3P02656 99 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 FBXO45P0C2W1 286 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 ATP5A1P25705 553 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 RPL4P36578 427 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 GNA13Q14344 377 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 MRPL2Q5T653 305 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 YOD1Q5VVQ6 348 aaPredicted RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 GARNL3Q5VVW2 1013 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 CD276Q5ZPR3 534 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 ARSKQ6UWY0 536 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 C7orf61Q8IZ16 206 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 BPIFA2Q96DR5 249 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 MS4A6EQ96DS6 147 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 TTYH1Q9H313 450 aaPredicted RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 PRDM9Q9NQV7 894 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 DZANK1Q9NVP4 752 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 MRPS18AQ9NVS2 196 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 RPS6KB2Q9UBS0 482 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 ZNF443Q9Y2A4 671 aaPredicted RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 EPOPA6NHQ4 379 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 CASC3O15234 703 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 SPDEFO95238 335 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 IGFALSP35858 605 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 GDI2P50395 445 aaKnown RBP11.47□□□□□ -0.57
HDAC4-208ENST00000463007 RAB28P51157 221 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 COL28A1Q2UY09 1125 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 C17orf107Q6ZR85 190 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 OR8S1Q8NH09 359 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 TMEM239Q8WW34 195 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 HS6ST2Q96MM7 605 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 ARL6Q9H0F7 186 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 TMEM168Q9H0V1 697 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 TMEM74BQ9NUR3 256 aa11.47□□□□□ -0.57
HDAC4-208ENST00000463007 A0A1W2PP55 124 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 C4orf47A7E2U8 309 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 SBK2P0C263 348 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 CEBPEQ15744 281 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 TMEM81Q6P7N7 255 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 CDK20Q8IZL9 346 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 RELL2Q8NC24 303 aaPredicted RBP11.46□□□□□ -0.57
HDAC4-208ENST00000463007 ADAMTS14Q8WXS8 1223 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 OR1F2PQ96R84 312 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 MYADMQ96S97 322 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 SDHAF2Q9NX18 166 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 CLDND1Q9NY35 253 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 KCMF1Q9P0J7 381 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 APOBEC3BQ9UH17 382 aaKnown RBP11.46□□□□□ -0.57
HDAC4-208ENST00000463007 GTF2A1LQ9UNN4 478 aa11.46□□□□□ -0.57
HDAC4-208ENST00000463007 HEATR5AQ86XA9 2040 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 A0A0G2JK05 382 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 C7orf66A4D0T2 115 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 EPXP11678 715 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 HTR2AP28223 471 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 ARFIP1P53367 373 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 RPS15P62841 145 aaKnown RBP11.46□□□□□ -0.58
HDAC4-208ENST00000463007 TAGLNQ01995 201 aaKnown RBP11.46□□□□□ -0.58
HDAC4-208ENST00000463007 HTR4Q13639 388 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 OR1Q1Q15612 314 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 FRRS1Q6ZNA5 592 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 RNF44Q7L0R7 432 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 STPG2Q8N412 459 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 OR56A1Q8NGH5 318 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 MICU1Q9BPX6 476 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 TSPAN10Q9H1Z9 355 aaPredicted RBP11.46□□□□□ -0.58
HDAC4-208ENST00000463007 ISYNA1Q9NPH2 558 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms