RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MYL12BO14950 172 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 PTP4A3O75365 173 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 ABCD3P28288 659 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 TSPAN7P41732 249 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 MTNR1AP48039 350 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 RGS6P49758 472 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 TPTEP56180 551 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 RNF4P78317 190 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 RAB40BQ12829 278 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 TCF15Q12870 199 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 KCNJ8Q15842 424 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 SLC35F1Q5T1Q4 408 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 FAM199XQ6PEV8 388 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-213ENST00000462730 USP43Q70EL4 1123 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 CXXC5Q7LFL8 322 aaKnown RBP13.23□□□□□ -0.29
HDAC6-213ENST00000462730 LNX2Q8N448 690 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 NFAM1Q8NET5 270 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-213ENST00000462730 RFKQ969G6 155 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 OTULINQ96BN8 352 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 TNFRSF13CQ96RJ3 184 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 C6orf62Q9GZU0 229 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-213ENST00000462730 LAT2Q9GZY6 243 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 MCCC2Q9HCC0 563 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 FGF20Q9NP95 211 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-213ENST00000462730 ICAM5Q9UMF0 924 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 A3GALT2U3KPV4 340 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 CFAP54Q96N23 3096 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 TEX51A0A1B0GUA7 166 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 ELOA3DA6NLF2 546 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-213ENST00000462730 SOCS6O14544 535 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 KLK3P07288 261 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-213ENST00000462730 ETV5P41161 510 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 ETV1P50549 477 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 ZNF117Q03924 483 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 ELOA3BQ3SY89 546 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 C3orf38Q5JPI3 329 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 STEAP3Q658P3 488 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 PAPD4Q6PIY7 484 aaKnown RBP13.23□□□□□ -0.29
HDAC6-213ENST00000462730 SHFQ7M4L6 423 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 MARCH3Q86UD3 253 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 CPOQ8IVL8 374 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 NANOGP1Q8N7R0 232 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 C17orf47Q8NEP4 570 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 ELOA3Q8NG57 546 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 HTRA1Q92743 480 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 TXNDC15Q96J42 360 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 LRFN5Q96NI6 719 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 OPALINQ96PE5 141 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 TAPBPLQ9BX59 468 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 RTN4RQ9BZR6 473 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 SEMA4CQ9C0C4 833 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 STRADBQ9C0K7 418 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 PARD6AQ9NPB6 346 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 H2AFY2Q9P0M6 372 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-213ENST00000462730 B3GALT1Q9Y5Z6 326 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 HEATR5AQ86XA9 2040 aa13.23□□□□□ -0.29
HDAC6-213ENST00000462730 FAM183AA6NL82 134 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 TBX1O43435 398 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 PPP1R3DO95685 299 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 MYL12AP19105 171 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 PNLIPRP2P54317 469 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 CSRP2Q16527 193 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 FAM69BQ5VUD6 431 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 NXNL2Q5VZ03 156 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 THOC7Q6I9Y2 204 aaKnown RBP13.22□□□□□ -0.29
HDAC6-213ENST00000462730 PLBD1Q6P4A8 553 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 FAM198BQ6UWH4 519 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 ATG4DQ86TL0 474 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-213ENST00000462730 APCDD1LQ8NCL9 501 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 PRSS33Q8NF86 280 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 PROKR2Q8NFJ6 384 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 MR1Q95460 341 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 CDC6Q99741 560 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 KLHDC3Q9BQ90 382 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 TBL1XR1Q9BZK7 514 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 NXF2Q9GZY0 626 aaKnown RBP13.22□□□□□ -0.29
HDAC6-213ENST00000462730 OR51E2Q9H255 320 aa13.22□□□□□ -0.29
HDAC6-213ENST00000462730 IGKV1D-42A0A075B6H8 117 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 TRBV11-1A0A0K0K1C0 115 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 A0A1W2PQD3 144 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 PMS2P1A4D2B8 440 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 HCRTR2O43614 444 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 NDUFB5O43674 189 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 GMFGO60234 142 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 PPM1BO75688 479 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 PNMTP11086 282 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 HTR1FP30939 366 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 SLC6A6P31641 620 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 SLC6A8P48029 635 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 E2F1Q01094 437 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 FOXK2Q01167 660 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 FHL1Q13642 323 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 SPHARQ15513 63 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 ISXQ2M1V0 245 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 FCRLBQ6BAA4 426 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 C16orf47Q6ZP98 133 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-213ENST00000462730 CPEB2Q7Z5Q1 589 aaKnown RBP13.21□□□□□ -0.29
HDAC6-213ENST00000462730 GID4Q8IVV7 300 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 POC5Q8NA72 575 aa13.21□□□□□ -0.29
HDAC6-213ENST00000462730 ZNF563Q8TA94 476 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms