RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 IDH2P48735 452 aaKnown RBP14.14□□□□□ -0.15
COL7A1-204ENST00000462475 ABCE1P61221 599 aaKnown RBP14.14□□□□□ -0.15
COL7A1-204ENST00000462475 HPCAP84074 193 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 SLC25A3Q00325 362 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 GABRA6Q16445 453 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 GPAT3Q53EU6 434 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 ANXA8L1Q5VT79 327 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 C9orf135Q5VTT2 229 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 AP1ARQ63HQ0 302 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 KLHL17Q6TDP4 642 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 CASP12Q6UXS9 341 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 MUC15Q8N387 334 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 ARFGAP2Q8N6H7 521 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 OR10H5Q8NGA6 315 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 MUS81Q96NY9 551 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 SLC35A5Q9BS91 424 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 C1QTNF6Q9BXI9 259 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.14□□□□□ -0.15
COL7A1-204ENST00000462475 TMEM181Q9P2C4 612 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 TMED7-TICAM2A0A0A6YYA0 188 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 TMEM72A0PK05 275 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 RNF212BA8MTL3 300 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 A8MV72 311 aaPredicted RBP14.13□□□□□ -0.15
COL7A1-204ENST00000462475 HMGN4O00479 90 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 MYZAPP0CAP1 466 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 IMPDH2P12268 514 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 MAGEA8P43361 318 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 CLK1P49759 484 aaKnown RBP14.13□□□□□ -0.15
COL7A1-204ENST00000462475 H3F3AP84243 136 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 TMEM249Q2WGJ8 235 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 FAM174BQ3ZCQ3 159 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 C6orf52Q5T4I8 152 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 CLEC2AQ6UVW9 174 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 RNF130Q86XS8 419 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 FBXL14Q8N1E6 418 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 ZNF525Q8N782 197 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 ANKFN1Q8N957 763 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 WDR31Q8NA23 367 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 VPS37AQ8NEZ2 397 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 AENQ8WTP8 325 aaKnown RBP14.13□□□□□ -0.15
COL7A1-204ENST00000462475 SORT1Q99523 831 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 AMBRA1Q9C0C7 1298 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 SLC38A1Q9H2H9 487 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 OSGIN1Q9UJX0 560 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 TMED7Q9Y3B3 224 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 RAP2CQ9Y3L5 183 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 FLVCR1Q9Y5Y0 555 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 ALPK2Q86TB3 2170 aa14.13□□□□□ -0.15
COL7A1-204ENST00000462475 ZC3H12DA2A288 527 aaKnown RBP14.12□□□□□ -0.15
COL7A1-204ENST00000462475 E9PBE3 544 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 CHRM4P08173 479 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 FABP6P51161 128 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 SYPL1Q16563 259 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 CHRFAM7AQ494W8 412 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 OR7E24Q6IFN5 339 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 PODNL1Q6PEZ8 512 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 PHC2Q8IXK0 858 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 TEX37Q96LM6 180 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 CCDC115Q96NT0 180 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 INPP5KQ9BT40 448 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 NUF2Q9BZD4 464 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 SLC7A10Q9NS82 523 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 TRAPPC4Q9Y296 219 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 SLC9A8Q9Y2E8 581 aa14.12□□□□□ -0.15
COL7A1-204ENST00000462475 AGAP5A6NIR3 686 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 ELOA3DA6NLF2 546 aaPredicted RBP14.11□□□□□ -0.15
COL7A1-204ENST00000462475 H7C417 338 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 IFNA2P01563 188 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 LBPP18428 481 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 FKBP2P26885 142 aaKnown RBP14.11□□□□□ -0.15
COL7A1-204ENST00000462475 TACR3P29371 465 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 HTR3AP46098 478 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 SLC1A6P48664 564 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 RPL14P50914 215 aaKnown RBP14.11□□□□□ -0.15
COL7A1-204ENST00000462475 POLR2HP52434 150 aaKnown RBP14.11□□□□□ -0.15
COL7A1-204ENST00000462475 CLNS1AP54105 237 aaKnown RBP14.11□□□□□ -0.15
COL7A1-204ENST00000462475 NME5P56597 212 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 DSCR9P59020 149 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 SLC35A1P78382 337 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 SLC17A1Q14916 467 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 RAB35Q15286 201 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 DPY19L1Q2PZI1 675 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 ELOA3BQ3SY89 546 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 TSPO2Q5TGU0 170 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 ZNF544Q6NX49 715 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 ELOA3Q8NG57 546 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 DDIT4LQ96D03 193 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 TRNT1Q96Q11 434 aaKnown RBP14.11□□□□□ -0.15
COL7A1-204ENST00000462475 TNFRSF13CQ96RJ3 184 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 TMEM109Q9BVC6 243 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 MANSC1Q9H8J5 431 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 SLC17A5Q9NRA2 495 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 UPB1Q9UBR1 384 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 BTNL2Q9UIR0 455 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 DCTN4Q9UJW0 460 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 ATP23Q9Y6H3 246 aa14.11□□□□□ -0.15
COL7A1-204ENST00000462475 ANK2Q01484 3957 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 BIRC5O15392 142 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 ZNF208O43345 1280 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 ZNF500O60304 480 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms